Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00195 ATGTTGCATGTAAACAAGATTTTTGAAGTTGGAATTTCCGAAGGTCTTCGAGAAGAATTGAAGTATTTAAACTTGGATATTGTTGAGAAGGCCAGTTCACACATAACAGCAGAACTTGGTTATGTCTATGAACTGGTAATTGGTGTTATAGATGTAAATAGAACTAAAGAGAAGGGATATGCTACAGTGGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTGAGGCAAATATACGAGGAACTGCCGGAATTTCTGGAAGAGGTTTCATCATTGGAATTAGCACAACTTCCCGTTCTATGCAAGGACAAGCGCATTCCTTGTATTGTTTATATACAGCAAATAGGATATTTAATGTGTATCTTTGGAGAAAAACCCGAAGAAACCACTCTGGAGCAACTTGTAGATTGGGAATACACATTTTGTGATACAGATGGAGAGACAAAAAAATACTTTTATAGAACACCAAAGACACGAGAATTGGACAGTCTGCTGGGAGATATCCACCATAAAATTCTAGATATGGAGAGGGCGATCACCAGAGACTTGTTTTCACGTATATTGTTGTTCCAAACCCATTTGATAAAGGTGGCAACTTTTGCAGCTGAACTGGACTGCTTTTTGTCAATGGCATTGGTTGCACGGCAGAACAATTATGTCAGGCCGTCGTTGACTGAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACTGTAGACACATTTATTCCTAATGACACTAAGATTCTTCATGATGGGAGAATTAATATCATCACTGGTCCTAATTTTTCTGGAAAAAGTATCTATCTAAAGCAGGTTGCTATAATTGTTTTCCTCTCCCACATTGGCAGTTTTGTGCCAGCTGATGCAGCAACTGTGGGTCTGACAGATAGAATATTTTGTGCAACAGGAAGCCGGCTTATGACAGCTGAACAATCAACATTTATGATTGATCTACATCAAATAGGGATGATGCTCAGGCATGCTACTTCGCGTTCTCTGTGTCTAGTGGATGAATTTGGTAAAGGCACTCTTACAGAAGATGGAATTGGTCTACTTGCTGGGACCATAAATCACTTTGTCACGACTGATGAACCTCCAAAGGTTTTTGTGTGCACTCATCTCATGGATTTATTGCATGGGCATTCCTTGACCAAGTCTGAGCAGATTAAGTTTTACACAATGAGTATACTGAGGCCCGACGGAAATTCCACGCATATTGAAGACATTGTATTTTTATACAGGCTTGTCCCTGGGCATGCGCATCATAGCTATGGTATGCTTTTCTTTACGGTTCATGCAGGTGTACCAGAGGAAATCATAAAAAGAGCAACAGCTGTGTTGGATACCGTTTCAAATAATAAACATGTTGAGCGGTTATCCAATGAGAACATCTCTGCTCAAGATCGTCAATACAAGGATGCCATGGAGAAGTTGTTGGAATTTGATATTGACAAAGGCGACTTAAAAATTTTCTTTGAGGATCATACTGACCCAAACGTTGCGACATCTACTTTAGGGTCGATACCACCTGGGTTAGGTTGGATCAAAGTTAATGTTGATGCGGCTGTTAGAATGTCTGATAATGAGGCTGTTTGCGGAGGAGTTCTGCGTGATCATTATGGTGTCTTTTTGCATGGTTTTATGGCAAACTTTGGAACTTGTTATATCTTAGAAGCCAAACTTTGGGCTATCCTCAATGGCCTCCAGCTAGCTTTGGATAGAGGCTGA 1746 0.3998 MLHVNKIFEVGISEGLREELKYLNLDIVEKASSHITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKRIPCIVYIQQIGYLMCIFGEKPEETTLEQLVDWEYTFCDTDGETKKYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRILLFQTHLIKVATFAAELDCFLSMALVARQNNYVRPSLTEENLLDIKNGRHVLQEMTVDTFIPNDTKILHDGRINIITGPNFSGKSIYLKQVAIIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGTINHFVTTDEPPKVFVCTHLMDLLHGHSLTKSEQIKFYTMSILRPDGNSTHIEDIVFLYRLVPGHAHHSYGMLFFTVHAGVPEEIIKRATAVLDTVSNNKHVERLSNENISAQDRQYKDAMEKLLEFDIDKGDLKIFFEDHTDPNVATSTLGSIPPGLGWIKVNVDAAVRMSDNEAVCGGVLRDHYGVFLHGFMANFGTCYILEAKLWAILNGLQLALDRG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00195 581 SMART mutATP5 258 454 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma14g00195 581 Pfam MutS family domain IV 67 169 IPR007861 GO:0005524|GO:0006298|GO:0030983
Gma14g00195 581 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 9 490 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma14g00195 581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 456 IPR027417 -
Gma14g00195 581 ProSitePatterns DNA mismatch repair proteins mutS family signature. 338 354 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma14g00195 581 CDD ABC_MSH5_euk 231 431 - -
Gma14g00195 581 Gene3D - 219 492 IPR027417 -
Gma14g00195 581 Pfam MutS domain V 262 455 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma14g00195 581 CDD RNase_H_like 523 581 IPR044730 -
Gma14g00195 581 PANTHER MUTS PROTEIN HOMOLOG 5 9 490 - -
Gma14g00195 581 SUPERFAMILY DNA repair protein MutS, domain III 19 218 IPR036187 -
Gma14g00195 581 Gene3D - 38 155 - -
Gma14g00195 581 Pfam Reverse transcriptase-like 524 581 IPR002156 GO:0003676|GO:0004523
Gma14g00195 581 Gene3D - 156 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00195 Gma-Chr14 1624788 1635891 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00195 K08741 - gmx:100794332 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00195 14 1624788 1635891 Gma14g00195 14 1624788 1635891 ECH
Gma14g00195 14 1624788 1635891 Gma02g02743 02 53106274 53119243 GST