Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02743 ATGGAGGACATGGACGAGATCGATGCCGTTCCTCAGGTTTACATGGCTTGCATCCTAAACGGTAATAGAATAGGAGTTTCTTATTATGATTCCACCCTTCGCCAACTTTATGTACTTGAAATTTGGGATGATGGTGACAGAGGCTTTCCAGTTATTGATCTGGTGAAATATCAAGCAAACCCTTTGGTTATTTACACAAGCACTAAAAGTGAAGAATCCTTCTTGTCTGCTCTGCAACAAAGTGATGGAGTAGCTGAGTCACCTACAGTAAAGCTTGTGAAAAGTTCAATATTCAGCTATGAGCAAGCCTGGCACAGATTAGTTTACCTGCGGGTGGCAGGGATGGATGATGGATTAAATGTGAAGGAGAAGATTTACTATCTGAGTTCCATGATGGACTTGGGAAGTGAAGTACAAGTTCGCGCTAGTGGTGGCCTTCTTGCAATATTAGAGAATGAAAGGATTGTAGATACTCTTGAGCAAAAAGAATCTGGAAATACATCAATTACAATAGATTCTTTAGCAGAAATTTCACTAAATAACTTTCTCAAACTTGATACAACAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCACCCAAGCCACATGGGAATTGGTAGAGCAAAAGAAGGGTACATACCCATTTCTCAAACTTCAGAACTTACGGTGACGATCCTCTCAAATTTTCCCCATTTCAGAAATTGGTTCTTAAGGCCTATACTTGATCTTGAAGTTCTAAACTACCGTTTAAATTCTGTATCCATCTATAGTCTAAAGAACTTGTTGCCTTTACGAGAAACCTTGAAATCTGTGAAGGACATCCCCCACTTGCTGAATAAATTTGACTCTCCAAGCTCTATATGCACTAGCTCTGATTGGACATCTCTCCTGAAGAGTATTTGTGCCCTGTTGCATGTAAACGAGATTTTTGAAGTCGGAATTTCCAAAGGTCTTCGAGAAGAATTGAAGTATTTAAACTTGGATATTGTTGAGAAGGCAAGTTCATACATAACAGCAGAACTTGGCTATGTCTATGAACTGGTAATTGGTGTTATAGATGTAAATAGAACTAAAGAGAAGGGATATGCGACAGTGGTAAAAGAAGGTTTCTGTGATGAGTTAGATGAGCTGAGGCAAATATACGAGGAACTGCCAGAATTTCTGGAAGAGGTTTCATCATTGGAATTAGCACAACTTCCCGTTCTATGCAAGGACAAGCGCATTCCTTGTATTGTTTATATACAGCAAATAGGATATTTAATGTGTATCTTTGAAGAAAAACCCGAAGAAACCACTCTGGAGCAACTTGTAGATTGGGAATACACATTTTGTGATACAGATGGAGAGACAAAAAAATACTTTTATCGTACGCCAAAGACACGAGAATTGGACAGTCTGCTGGGAGATATCCACCACAAAATTCTAGATATGGAGAGGGCGATTGCCAGAGACTTGTTTTCACGTATACTGTTGTTCCGAACCCATTTGATAAAGGTGGCAACTTTTGCAGCTGAACTGGACTGCTTTTTGTCAATGGCATTGGTTGCACGGCAGCACAATTATGTCAGGCCTTCATTGACTGAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACTGTAGACACATTTATTCCTAATGACACTAGGATTCTTCATGATGGAAGAATTAATATCATCACTGGTCCTAATTTTTCTGGAAAAAGTATCTATATAAAGCAGGTTGCTATAATTGTTTTTCTCTCCCACATTGGCAGTTTTGTGCCAGCTGATTCTGCAACTGTGGGTCTGACAGATAGAATATTTTGTGCAACAGGAAGCAGGCTTATGACAGCTGAACAATCAACATTTATGATTGATCTACATCAAATAGGGATGATGCTCAGGCATGCTACTTCGCGTTCTCTGTGTCTGGTGGATGAATTTGGTAAAGGCACTCTTACAGAAGATGGAATTGGTCTACTTGCTGGGACCATAAATCACTTTGTCACAACTGATGAACCTCCAAAGGTTTTTGTGTGCACTCATCTCATGGATTTATTGCATGGGCATTCCTTGACCAAGTCTGAGCAGATTAAGTTTTACACAATGAGTATGCTGAGGCCTGACGAAAATTCCACACATATTGAAGACATTGTATTTTTATACAGGCTTGTCCCTGGGCGTGCCCATCATAGCTACGGGCTGCACTGTGCACTGC 2221 0.3971 MEDMDEIDAVPQVYMACILNGNRIGVSYYDSTLRQLYVLEIWDDGDRGFPVIDLVKYQANPLVIYTSTKSEESFLSALQQSDGVAESPTVKLVKSSIFSYEQAWHRLVYLRVAGMDDGLNVKEKIYYLSSMMDLGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFLKLDTTAHEALQIFQIDKHPSHMGIGRAKEGYIPISQTSELTVTILSNFPHFRNWFLRPILDLEVLNYRLNSVSIYSLKNLLPLRETLKSVKDIPHLLNKFDSPSSICTSSDWTSLLKSICALLHVNEIFEVGISKGLREELKYLNLDIVEKASSYITAELGYVYELVIGVIDVNRTKEKGYATVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKRIPCIVYIQQIGYLMCIFEEKPEETTLEQLVDWEYTFCDTDGETKKYFYRTPKTRELDSLLGDIHHKILDMERAIARDLFSRILLFRTHLIKVATFAAELDCFLSMALVARQHNYVRPSLTEENLLDIKNGRHVLQEMTVDTFIPNDTRILHDGRINIITGPNFSGKSIYIKQVAIIVFLSHIGSFVPADSATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGTINHFVTTDEPPKVFVCTHLMDLLHGHSLTKSEQIKFYTMSMLRPDENSTHIEDIVFLYRLVPGRAHHSYGLHCAL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02743 740 PIRSF MSH2 1 740 IPR011184 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 Pfam MutS domain V 566 739 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 Pfam MutS domain III 234 515 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 22 739 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma02g02743 740 Gene3D - 523 740 IPR027417 -
Gma02g02743 740 SMART DNAend 222 547 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 Gene3D - 234 515 - -
Gma02g02743 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 739 IPR027417 -
Gma02g02743 740 CDD ABC_MSH5_euk 535 739 - -
Gma02g02743 740 PANTHER MUTS PROTEIN HOMOLOG 5 22 739 - -
Gma02g02743 740 ProSitePatterns DNA mismatch repair proteins mutS family signature. 642 658 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 SUPERFAMILY DNA repair protein MutS, domain III 218 522 IPR036187 -
Gma02g02743 740 Gene3D - 318 459 - -
Gma02g02743 740 Pfam MutS family domain IV 371 473 IPR007861 GO:0005524|GO:0006298|GO:0030983
Gma02g02743 740 SMART mutATP5 562 740 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02743 Gma-Chr2 53106274 53119243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02743 K08741 - gmx:100797567 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02743 02 53106274 53119243 Gma02g02743 02 53106274 53119243 ECH
Gma14g00195 14 1624788 1635891 Gma02g02743 02 53106274 53119243 GST