Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00187 ATGAACAAATTCAACAAATCTGAACTTCTTGTGCTCTTTGTCCTTACTCTTCTCCTTGCGATCACACCCTTGTTACCTTCCTCTCTGAGACCAACCTACCTTTACTTCATCTTTAACGTTCTCATCATTGCACTTGCAGCTGAAGCGGGTGTTCTCTCAGTTTCTTCTAAGCCTTTAGAAGACAAAAAACAACATGTTTCTGTTACCCAGAAACCTGTAATGCCCCCAGAAGTGTATGAACCTGAGGAAAGGGTGGAAGTGGGTGCCTCAGAACATGATGAAAAGAAGCCTAAGGTTGTTGAAAAGCCTGCTTCTGATGAGAAGATTGTTGGTGTCACTGAGGTGAAAAAGTTTCCTTCAATGCCAAATCTTTTGCTCATAGGAGGTGGAGAAAGTGAAGGAGAAGTCATGGATGAGGAGATTGAAGCTGAAGATGAGGTTGGGGGAGTTAATGGGCAAGAGCTGTTTGCAAAAGCTGAGGCCTTCATTGGGAACTTCTACAACCAGTTAAAGAAGGATAGAGATCGAGAATTCTTGGCTTTATGA 546 0.4286 MNKFNKSELLVLFVLTLLLAITPLLPSSLRPTYLYFIFNVLIIALAAEAGVLSVSSKPLEDKKQHVSVTQKPVMPPEVYEPEERVEVGASEHDEKKPKVVEKPASDEKIVGVTEVKKFPSMPNLLLIGGGESEGEVMDEEIEAEDEVGGVNGQELFAKAEAFIGNFYNQLKKDRDREFLAL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00187 181 Pfam Cotton fibre expressed protein 153 171 IPR008480 -
Gma14g00187 181 PANTHER OS01G0532300 PROTEIN 1 175 - -
Gma14g00187 181 PANTHER OS01G0532300 PROTEIN 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00187 Gma-Chr14 1578209 1578754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00187 - - mtr:MTR_5g093440 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00802 18 9015415 9020469 Gma14g00187 14 1578209 1578754 PCT
Gma08g02988 08 46453394 46453936 Gma14g00187 14 1578209 1578754 PCT
Gma14g00187 14 1578209 1578754 Gma18g00802 18 9015415 9020469 PCT
Gma14g00187 14 1578209 1578754 Gma08g02988 08 46453394 46453936 PCT