Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02988 ATGAACAAGTTTAAGAAATCTCAAGTTCTAGTTCTCTTAGTTCTAGTTCTTCTTCTTCTCATCACACCCTTTTTACCTTCCTCTTTGAGACCAACCTACTTGTATTTCATTATAAACTTCCTCATCATGGCACTTTTTGCTGAAGCTGGCCTCATTTCAGATTTTTCTAGGCCTTTAGAAGATAAAAAGCAATCTACTTCTGTTACCAATTCCACTTCTGAGAAAAGAGAAGTTTCCAATTCCACCCCTACAGTTGTTGGAGATGATGTCTCAGAACATGTTGAAAAGTCTGCATCTGAGAGGGTTGTTTGTGTCACCAAAGTGGACAAGGTGCAAAATTCTCCTTCAATGCCTACCCTTTTATTCATAGGGGGTGGAGAAGCTGATGAACAGGTCATGGATGAAGAGCTTGAAGCAGAAGAGGAGCTTGGAGGAGTAAATGGGCAAGAGCTCTTTACAAAAGCTGAGGCCTTCATTGGGAACTTCTACAAGCAACTGAAGATGCAAAGTGAGGAATCTTGGATTTATCAAAAAGCCCTTTAG 543 0.4033 MNKFKKSQVLVLLVLVLLLLITPFLPSSLRPTYLYFIINFLIMALFAEAGLISDFSRPLEDKKQSTSVTNSTSEKREVSNSTPTVVGDDVSEHVEKSASERVVCVTKVDKVQNSPSMPTLLFIGGGEADEQVMDEELEAEEELGGVNGQELFTKAEAFIGNFYKQLKMQSEESWIYQKAL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02988 180 MobiDBLite consensus disorder prediction 63 87 - -
Gma08g02988 180 PANTHER OS01G0532300 PROTEIN 1 174 - -
Gma08g02988 180 Pfam Cotton fibre expressed protein 149 174 IPR008480 -
Gma08g02988 180 PANTHER OS01G0532300 PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02988 Gma-Chr8 46453394 46453936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02988 - - gmx:100305806 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02988 08 46453394 46453936 Gma08g02988 08 46453394 46453936 ECH
Gma18g00802 18 9015415 9020469 Gma08g02988 08 46453394 46453936 GST
Gma08g02988 08 46453394 46453936 Gma14g00187 14 1578209 1578754 PCT
Gma14g00187 14 1578209 1578754 Gma08g02988 08 46453394 46453936 PCT