Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00167 ATGGCGAACGAGAACGAACCCGCGAAGCTGCTGTTACCATACCTTCAACGCGCCGATGAGTTGCAAAAGCACGAACCACTCGTCGCTTATTACTGTCGATTATATGCTATGGAACGGGGGCTGAAGATTCCGCAAAGTGAGCGCACGAAGACCACTAATGCTCTTCTGGTTTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCCAGTTGGGGCCTGAAGACAATTTATATCTCGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCCGGAAGAGCAGATTTGAATACAGCGAAAACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGAAATAAGAAAAGCCTTGAAAGAAGGAAGGAAGCCCACTGCTGGACCCCCTGACGGTGATGAGGACCTCTCAGTTCCTTTGAGTTCTTCAAGTGATAGATATGACCTTGGGACCACCGAAACTACTGTTTCCAGTCCTGGACCAGAATCTGATTCATCACATAGTTATCATAGCCCTGTCAACTACCAGAATCTGCCAAGCATTCAGCCTACTCCTAAATTTCATGATACTGTTAACGACCAACATTCTGCAGATATTCCACCATCTATGCCTTTTCATGACAGAGTAGATAATAACAAGCATTCTTCCGTTGTTTCTCCATCATCTCACTCTTACACACTTGGAGTTTATccttcccaagattatcattctcctccaccttcccaagactatcatcctcctccaccttcccaagattatcattctcctccaccttcccaagactatcaccatcctccaccttcccaagactatcatcatcctccaccttcccaagattatcatcctcctccaccttcccaagattaccatcctgctccaccttcccaagattaccatcctccACCTGCTAGATCAGAAAGTTCTTATCCCGAGCCCTACAACCATCAGCAATACTCACCAGAGAATTCACAGCATTTAGGTCCTAATTACCCTTCTCATGAAACTTCCTCTTTTTCTTATCCCCATTTTCAGTCTTATCCAAGTTTTACAGAAAGCAGCCTTCCCTCAGTCCCATCCAATTATACTTATTATCAAGGGTCAGATGCTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAACCATTCATCAAGTGCTCAACACAGTTCAGGCAGCAGAAATGGAACTGTCGTGGAACCTAAGCCAACTACTCAGACATACCAGTATGACAGTAGCTACCAACCAGCACCTGAAAAAATAGCAGAAGCACACAAGGCTGCAAGATTTGCTGTTGGGGCACTGGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCCCTTGAGTTGTTGACAAATCCATCAGCTGGTCAGTAA 1464 0.3743 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAAEIRKALKEGRKPTAGPPDGDEDLSVPLSSSSDRYDLGTTETTVSSPGPESDSSHSYHSPVNYQNLPSIQPTPKFHDTVNDQHSADIPPSMPFHDRVDNNKHSSVVSPSSHSYTLGVYPSQDYHSPPPSQDYHPPPPSQDYHSPPPSQDYHHPPPSQDYHHPPPSQDYHPPPPSQDYHPAPPSQDYHPPPARSESSYPEPYNHQQYSPENSQHLGPNYPSHETSSFSYPHFQSYPSFTESSLPSVPSNYTYYQGSDASYSSQSAPLTTNHSSSAQHSSGSRNGTVVEPKPTTQTYQYDSSYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00167 487 Pfam Vta1 C-terminal domain 444 481 IPR041212 -
Gma14g00167 487 Gene3D - 4 152 IPR023175 -
Gma14g00167 487 MobiDBLite consensus disorder prediction 267 327 - -
Gma14g00167 487 MobiDBLite consensus disorder prediction 336 365 - -
Gma14g00167 487 MobiDBLite consensus disorder prediction 164 217 - -
Gma14g00167 487 MobiDBLite consensus disorder prediction 148 365 - -
Gma14g00167 487 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 295 485 IPR044538 GO:0032511
Gma14g00167 487 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 314 IPR044538 GO:0032511
Gma14g00167 487 MobiDBLite consensus disorder prediction 241 266 - -
Gma14g00167 487 Pfam Vta1 like 13 148 IPR039431 -
Gma14g00167 487 MobiDBLite consensus disorder prediction 395 439 - -
Gma14g00167 487 Gene3D Immunoglobulin FC, subunit C 443 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00167 Gma-Chr14 1346978 1349891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00167 1 118 Glycosyltransferase AT2G31960 25.984 1.31e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00167 K12199 - gmx:100783739 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00167 14 1346978 1349891 Gma14g00167 14 1346978 1349891 ECH
Gma14g00167 14 1346978 1349891 Gma02g02771 02 53321707 53324100 GST