Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02771 ATGGCGAACGAGAACGAACCCGCGAAGCTGCTGTTGCCATACCTTCAACGCGCCGATGAATTGCAAAAGCATGAACCACTCGTCGCTTATTACTGTCGATTATATGCAATGGAACGGGGGTTGAAGATTCCGCAAAGTGAGCGCACGAAGACCACTAATGCTCTTCTGGTTTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCCAGTTGGGGCCTGAAGACAATTTATATCTCGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGATTTGACTACAGCAAAAACATTTTATGCTGCCAGTATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAAAAATATGCTGTGTGGAAAGCAGCTGAAATAAGAAAAGCTTTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCCCCTGATGGTGATGAGGATCTGTCAGTTCCTTTGAGTTCTTCAAGTGATAGATATGACCTTGGGACTACTGAAAATACTGTTTCCAGTCCTGGACCAGAATCTGATTCATCAAGAAGTTATCATAACCCTGCTAACTACCAGAATCTGCCAAGCATTCATCCTGCTGCTCCTAAATTTCATGATACTGTTAACGACCAACATTCTGCTAATATTCCATCATCTATGCCATTTCATGATAGAGTAGATAATAACAAGCATTCTTCCGTTGTTTCTCCATCATCTCACTCTTTCACACCTGGAGTTTATCCTtcccaagactaccattctcctccaccttcccgagactatcattctcctccaccatcccaagactatcattctcctccatcgtcccaagattatcatcctcctccaccatcccaagattaccatcctccaccgtcccaagattaccatcctccACCTGCTAGATCTGAAGGTTCTTATTCTGAGCTCTACAATCATCAGCAATACTCACCAGAGAATTCACAGCATTTAGGTCCTAACTACCCTTCTCATGAAACTTCCTCTTATTCTTATCCCCATTTTCAGTCTTATCCAAGTTTTACAGAAAGCAGCCTTCCATCAGTCCCATCAAACTATACTCATTATCAAGGATCAGATGTTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAACCATTCATCAAGTGCTCAACACAGTAGCAGAAATGAAACTGTGGAACCTAAGCCAACAACTACTCAGGCATACCAGTACGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCAGAGGCACACAAGGCTGCAAGATTTGCCGTTGGGGCACTGGCATTTGATGATGTCTCAGTTGCAGTAGACTTCTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCAGCTGGCCAGTAA 1404 0.3811 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLTTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAAEIRKALKEGRKPTAGPPDGDEDLSVPLSSSSDRYDLGTTENTVSSPGPESDSSRSYHNPANYQNLPSIHPAAPKFHDTVNDQHSANIPSSMPFHDRVDNNKHSSVVSPSSHSFTPGVYPSQDYHSPPPSRDYHSPPPSQDYHSPPSSQDYHPPPPSQDYHPPPSQDYHPPPARSEGSYSELYNHQQYSPENSQHLGPNYPSHETSSYSYPHFQSYPSFTESSLPSVPSNYTHYQGSDVSYSSQSAPLTTNHSSSAQHSSRNETVEPKPTTTQAYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSVAVDFLKKSLELLTNPSAGQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02771 467 Gene3D Immunoglobulin FC, subunit C 423 462 - -
Gma02g02771 467 Pfam Vta1 C-terminal domain 424 461 IPR041212 -
Gma02g02771 467 MobiDBLite consensus disorder prediction 318 347 - -
Gma02g02771 467 MobiDBLite consensus disorder prediction 269 309 - -
Gma02g02771 467 Pfam Vta1 like 13 148 IPR039431 -
Gma02g02771 467 MobiDBLite consensus disorder prediction 164 205 - -
Gma02g02771 467 MobiDBLite consensus disorder prediction 374 414 - -
Gma02g02771 467 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 298 465 IPR044538 GO:0032511
Gma02g02771 467 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 310 IPR044538 GO:0032511
Gma02g02771 467 MobiDBLite consensus disorder prediction 242 259 - -
Gma02g02771 467 Gene3D - 4 152 IPR023175 -
Gma02g02771 467 MobiDBLite consensus disorder prediction 148 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02771 Gma-Chr2 53321707 53324100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02771 1 118 Glycosyltransferase AT2G31960 26.772 3.10e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02771 K12199 - gmx:100806599 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02771 02 53321707 53324100 Gma02g02771 02 53321707 53324100 ECH
Gma14g00167 14 1346978 1349891 Gma02g02771 02 53321707 53324100 GST