Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00122 atgtcccacacaaaactttcattgcatttggatgaatttgttcatatcaaaactgggttgcaggtatgtgaatttcctaacttgtataatgaatttttatggagtcaaactctgattagaggagaaaagttttgcggattgaactttacatattttctaccttatgtaatagctaatagtttcaatattgatagtgtgaaattatgCTTTATCCGGCTACTGACCTACTGTCTGGTAGTTTCTGTTGTGGATCCTCAACCTGGTGAAACTATTATTGATTGTTGTGCTGCTCCTGGCGGAAAGACCCACTACATGGCCTCTCATTTAAGTGGCCAAGTGGTTGAGAATTCTTATAAAGAGACAGCAAAGTTGCACCAAGTGGATGGTATCATTATTGCCATCCATGCTGATCTTCGTACATTACCTGATAGCGGACAGCTTAAGAGTAACAAAGTTTTGTTGGACGCTCCATGCTCTGGACTTGGTGTTCTTTCCAAAAGAGTGGACTTGCGTTGGAACAGGAATCTGGAGGATATGGAACAACTGAAGGAATTTCAGGATGAGCTCCTGGATGCAGCATCCAAATTGGTAAAACCTGGGGGAGTATTAGTTTACAGTTCATGCTCCATAGATCCTGAAGAGAATGATGACAGGGTATTTCTTGTAACACATCCGGATTTCCACATTGATCCTGTAGACAGATATGTTCCTCCTGATTTTGTGACAAGCAGTGGTTTCTTTTTCTCCAACCCAGTTAAACATTCAGTAGATGGCTCCTTTGCAGCTCATTTAGTACGAGATTTATAG 807 0.3209 MSHTKLSLHLDEFVHIKTGLQVCEFPNLYNEFLWSQTLIRGEKFCGLNFTYFLPYVIANSFNIDSVKLCFIRLLTYCLVVSVVDPQPGETIIDCCAAPGGKTHYMASHLSGQVVENSYKETAKLHQVDGIIIAIHADLRTLPDSGQLKSNKVLLDAPCSGLGVLSKRVDLRWNRNLEDMEQLKEFQDELLDAASKLVKPGGVLVYSSCSIDPEENDDRVFLVTHPDFHIDPVDRYVPPDFVTSSGFFFSNPVKHSVDGSFAAHLVRDL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00122 268 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 1 267 IPR001678 GO:0008168
Gma14g00122 268 PANTHER NOL1/NOP2/SUN FAMILY PROTEIN / ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN 68 267 - -
Gma14g00122 268 Gene3D Vaccinia Virus protein VP39 65 266 IPR029063 -
Gma14g00122 268 PRINTS RNA (C5-cytosine) methyltransferase signature 200 216 IPR023267 GO:0001510
Gma14g00122 268 PRINTS RNA (C5-cytosine) methyltransferase signature 92 102 IPR023267 GO:0001510
Gma14g00122 268 PRINTS RNA (C5-cytosine) methyltransferase signature 249 266 IPR023267 GO:0001510
Gma14g00122 268 PRINTS RNA (C5-cytosine) methyltransferase signature 150 162 IPR023267 GO:0001510
Gma14g00122 268 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 266 IPR029063 -
Gma14g00122 268 CDD AdoMet_MTases 90 206 - -
Gma14g00122 268 Pfam 16S rRNA methyltransferase RsmB/F 82 264 IPR001678 GO:0008168
Gma14g00122 268 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 68 267 IPR023267 GO:0001510
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00122 Gma-Chr14 1015149 1017911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00122 K03500 - gmx:100779327 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00122 14 1015149 1017911 Gma14g00122 14 1015149 1017911 ECH
Gma14g00122 14 1015149 1017911 Gma02g02815 02 53694479 53701552 GST