Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03225 ATGGAGTTGATTTCAGGTCTACCAGAGGACGTAGCCCGAGACTGCTTAATTAGGATTCCCTACGAGCAATTCCCAGCGGTTGCTTCCGTCTGCAAAGGCTGGAACACGGAGATTCACTCGCCGGACTTTCACCGGCGTAGAAGAACCACCAAACAAGCCCAGGAAATCCTCGTCACGGTTCAATCCAATATAGACTCCGAAAAAACTCGAACCGGTTTGCTCGCGAAGTCCACCACGAACCCGGTTTACCGGCTCAGCGTATTCGAACCGAAAACGGGTTCATGGAGCGAGTTACCCTTGGGACCCGAACTCGCCTTCGGGTTACCCATGTTCTGTCGGATAGCGGGTGTCGGGTTCGACCTTGTCGTAATGGGCGGGTGGGACCCAGACTCGTGGAAAGCGTCGAATTCGGTTTTTATCTACAACTTCCTGTCGGCCAAGTGGCGGCGTGGGGCCGACATGCCGGGTGGGCCCCGCACGTTTTTCGCATGCGCGTCGGATCAGAACAATCAAACGGTGTACGTCGCGGGCGGACACGACGAGGAGAAGAACGCGCTGAGGTCAGTGCTTGCGTATGACGTGGCCAGAGACCTGTGGGTCCCTCTACCCGACATGTCACGTGAGCGCGACGAGTGCAAGGCCGTGTTCCGCCGTGGCGCGCTTTGCGTCGTCGGAGGGTACTGCACAGAGATGCAGGGCAGGTTCGAGCGGAGCGCGGAGGTTTTCGACGTTGCCACGTGGAAGTGGGGCCCGGTGGAGGAGGAGTTCATGGATGCCGCCGCGTGTCCACGCACGTTCGTCGACGGCGGGGATGGTGCGATGTACATGTGCTGCGGCGGTGACGTGGTTGCGTTGCAAGGGGACACGTGGCGGAATGTGGCGAAGGTGCCGGGTGAAATACGGAACGTTGCGTGCGTGGGAGTGTGGGAAGGGGCAATGCTGGTCATTGGATCGAGTGGGTTTGGGGAACCGCATGTGGGCTTTGTGTTGGATCTGAAAAGTTGGGCTTGGACTAAACTTGTGAGCCCAGAGGAGTACACTGGTCACGTTCAATCTGGTTGCCTTTTGGAAATTTAG 1077 0.5803 MELISGLPEDVARDCLIRIPYEQFPAVASVCKGWNTEIHSPDFHRRRRTTKQAQEILVTVQSNIDSEKTRTGLLAKSTTNPVYRLSVFEPKTGSWSELPLGPELAFGLPMFCRIAGVGFDLVVMGGWDPDSWKASNSVFIYNFLSAKWRRGADMPGGPRTFFACASDQNNQTVYVAGGHDEEKNALRSVLAYDVARDLWVPLPDMSRERDECKAVFRRGALCVVGGYCTEMQGRFERSAEVFDVATWKWGPVEEEFMDAAACPRTFVDGGDGAMYMCCGGDVVALQGDTWRNVAKVPGEIRNVACVGVWEGAMLVIGSSGFGEPHVGFVLDLKSWAWTKLVSPEEYTGHVQSGCLLEI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03225 358 SUPERFAMILY F-box domain 3 50 IPR036047 GO:0005515
Gma13g03225 358 PANTHER OS02G0208700 PROTEIN 1 358 IPR044595 GO:0080037|GO:2000762
Gma13g03225 358 Pfam F-box domain 4 45 IPR001810 GO:0005515
Gma13g03225 358 Gene3D - 44 351 IPR015915 GO:0005515
Gma13g03225 358 Pfam Kelch motif 170 206 IPR006652 GO:0005515
Gma13g03225 358 Pfam Kelch motif 120 155 IPR006652 GO:0005515
Gma13g03225 358 SMART kelc_smart 120 168 IPR006652 GO:0005515
Gma13g03225 358 SMART kelc_smart 172 219 IPR006652 GO:0005515
Gma13g03225 358 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 358 - -
Gma13g03225 358 SUPERFAMILY Kelch motif 79 340 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03225 Gma-Chr13 46326388 46328247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03225 - - gmx:100817910 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03225 13 46326388 46328247 Gma13g03225 13 46326388 46328247 ECH
Gma13g03225 13 46326388 46328247 Gma15g00129 15 1093077 1094670 GST
Gma13g03225 13 46326388 46328247 Gma07g00323 07 2775524 2777182 PCT
Gma13g03225 13 46326388 46328247 Gma08g01901 08 17073476 17075066 PCT
Gma07g00323 07 2775524 2777182 Gma13g03225 13 46326388 46328247 PCT
Gma08g01901 08 17073476 17075066 Gma13g03225 13 46326388 46328247 PCT