Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01901 ATGGAGTTAATTTCGGGATTGCCAGAGGATGTTGCCCGAGACTGTTTAATTCGGGTTTCGTATCAACAGTTTCCAACGGTGGCGTCAGTGTGCAAACTCTGGAAATCGGAGATTCACGCGCCGGAGTTCCATCGTCAACGGCGTAGCACAAAGCACACCCAGAAGGTCATAGCGATGGTTCAAGCACACGTAGAACCGGGAACCGGTTCGACCAAGCGCGTGAAGAACCCGGTTTACTGGCTCAGCGTGTTCGAACCGGAAACGGGTAACTGGAGTAAGATTCCACCACCACCGGAATTTTATTCGGGGCTACCCATGTTCTGTCAGTTAGTGAGTGTCGGGTACGATCTGGTTGTGTTGGGTGGGTTGGACCCGAATTCGTGGGAAGCATCAAATTCTGTTTTTGTTTATAATTTCTTGTCGGCCAAGTGGCGCCGCGGGACGGACATGCCGGGTGGGCGCCGCATGTTCTTCTCGTGCGCGTCAGATTCCGAGGGGACAGTTTTTGTCGCCGGCGGACACGACAATGAGAAGAACGCGCTGCGGTCTGCGCTGGCCTACGATGTTTCCTCGGACCGGTGGGTTGTGCTTCCCGACATGGCGGCGGAGCGCGACGAGTGCAAGGGCGTTTTCAGCCGCGGGAGGTTTGTCGCCGTCGGCGGTTACCCGACGGAGACGCAGGGAAGGTTCGTGAAGAGTGCGGAGGCGTTCGATCCGGCCACGAGGAGCTGGAGTGAAGTGAAGGACTTCTTGGATTGCGCCACGTGTCCGAGAACCTTCGTGGACGGTGGCGATGACGAGGGGGTGTTCTTGTGCAGCGGCGAGGACTTGATTGCCCTTCGTGGGGACACGTGGCAGAAGATGGCGTCCCTCCCGGGGGAGATACGAAACGTGTCGTACGTTGGGGCGTTTGATGGGACGCTGGTGTTGATTGGATCCAGCGGCTATGGTGAAGTCCACGTGGCTTATGCGTTCGATGTGAAGAGTTGCAATGGGAGGAAACTGGAGAGCCCAGAGGGGTTCAGGGGCCATGTCCAAACTGGGTGTGTTTTGGAGATTTAG 1062 0.5687 MELISGLPEDVARDCLIRVSYQQFPTVASVCKLWKSEIHAPEFHRQRRSTKHTQKVIAMVQAHVEPGTGSTKRVKNPVYWLSVFEPETGNWSKIPPPPEFYSGLPMFCQLVSVGYDLVVLGGLDPNSWEASNSVFVYNFLSAKWRRGTDMPGGRRMFFSCASDSEGTVFVAGGHDNEKNALRSALAYDVSSDRWVVLPDMAAERDECKGVFSRGRFVAVGGYPTETQGRFVKSAEAFDPATRSWSEVKDFLDCATCPRTFVDGGDDEGVFLCSGEDLIALRGDTWQKMASLPGEIRNVSYVGAFDGTLVLIGSSGYGEVHVAYAFDVKSCNGRKLESPEGFRGHVQTGCVLEI 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01901 353 SMART kelc_smart 215 258 IPR006652 GO:0005515
Gma08g01901 353 SMART kelc_smart 116 164 IPR006652 GO:0005515
Gma08g01901 353 SMART kelc_smart 167 214 IPR006652 GO:0005515
Gma08g01901 353 Gene3D - 44 339 IPR015915 GO:0005515
Gma08g01901 353 SUPERFAMILY F-box domain 3 53 IPR036047 GO:0005515
Gma08g01901 353 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 353 - -
Gma08g01901 353 PANTHER OS02G0208700 PROTEIN 1 353 IPR044595 GO:0080037|GO:2000762
Gma08g01901 353 Pfam Kelch motif 166 200 IPR006652 GO:0005515
Gma08g01901 353 Pfam Kelch motif 105 154 - -
Gma08g01901 353 SUPERFAMILY Kelch motif 76 327 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01901 Gma-Chr8 17073476 17075066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01901 7 220 Miscellaneous Gene Families AT4G33900 26.180 1.43e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01901 - - gmx:100819561 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01901 08 17073476 17075066 Gma08g01901 08 17073476 17075066 ECH
Gma07g00323 07 2775524 2777182 Gma08g01901 08 17073476 17075066 GST
Gma13g03225 13 46326388 46328247 Gma08g01901 08 17073476 17075066 PCT
Gma15g00129 15 1093077 1094670 Gma08g01901 08 17073476 17075066 PCT
Gma08g01901 08 17073476 17075066 Gma13g03225 13 46326388 46328247 PCT
Gma08g01901 08 17073476 17075066 Gma15g00129 15 1093077 1094670 PCT