Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03224 ATGGAGGAAAGCATCAATAGAGGGGAATATCAACCTAATTTGGCTAAACAGTCTTCTTTGAGATTAGGTGGCAGTTTTAAATCAACATTGTCTGGAAGATCAAATCCTCGAAATTCCCCTTCATTCCGGCGGCTTAATTCTGTGCGAACGCCAAGAAAAGAAGGAAGGATCAGCGTAGGCGGTGCACTGTGGTTTCGGAGCAATCATTTACTTTTGTGGTTGCTTCTAATCACCCTCTGGGCTTATCTTGGATTTTTTGTTCAGTCCAGGTGGGCTCATAGTGATAAGAAGGAAGAATTTTCTGGCTTTGGAACCGGGCCAAGAAATACCAACACAGATGCTGAACAGATTCAGCGACGTGATTTGCTTGCTAGCGATAAATCATTATCTGCTAATAATGAGACTGGTGCAGATATAGCAGGGATCAGTAAAACTATAAGTGTAGCTTTGGCAAAGAAAGACAATGATGTTCCATCTCATCGTAAAACAAGCTCAAAGAAGAGGAGCAAGAGCAGACGTTCTTCGAAAGGTAAATCACGTGGTAAGCTGAAACCAACTACAGAAATTAAGAACACTGATATAGAGGAGCAGGAGCCAGAAATTCCTACAACCAATAATACGTATGGATTGCTTGTTGGTCCGTTTGGCCCAATGGAGGATAGGATTCTGGAATGGAGTCCTGAGAAACGTTCTGGCACATGTAACAGGAAGGAGGACTTTGCACGTCTGGTTTGGTCCAGAAGATTTATCTTGATATTCCACGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTTTTGAGCTGTGGGGCCACTGTTTCAGCTGTTGTGCTTAGCAGGAAAGGTGGTTTAATGTCAGAGCTTGCTAGGAGACGGATCAAGGTGCTTGAGGACAAATCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTAATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGAACAATATATTGATCATTTCCCAGCTGGTGCAAGCCAAGTTGCCTGGTGGATTATGGAAAATCGACGAGAGTACTTTGATCGTTCAAAGGATATATTGCACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGCAAAAATGGTGTGAAGAGGAAAGCATAAAACTGAGATCCCTCCCTGAAATTGTTGCATTGTCTGTTAATGAAGAACTGGCATTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTTAGTACCGAGAAAATGGTTGAGAAAAAGCAGTTATTGAGGGAATCAGTCCGAAAAGAAATGGGCCTAACTGATAATGACATGCTTGTGATATCTCTAAGCAGCATCAACCCTGGGAAGGGCCAGCTATTGCTTCTTGAATCAGTAAGCTCAGTACTTGAACAAGGACAGTTGCAAGATGATAAGAAAATGAAAAAAGTGTCAAATATAAAGGAAGGCCTATCTTCCCTGACTAGAAAGCATCGTATTAGAAAATTGTTGCCATTGATGAAGAATGGGAAAGTAGCTTCAAATAGTATCTCAAGCAATTCTTTAAGCAGAAGGAAACAAGTGTTGCCTAATGGCAAAGGAACAATTCAACAATCTCTCAAACTTCTCATTGGTTCTGTTAGATCAAAGAGTAACAAGGCAGATTATGTTAAAAGCCTTCGAAGTTTCTTAGAACAACATCCAAACGCCTCGACATCAATTTTTTGGACTCCAGCCACAACTCGAGTTGCCTCACTTTACTCTGCTGCAGATGTTTATGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCATATGGTCTTCCGGTTCTTGGAACGGATGCTGGAGGAACACGGGAGATTGTTGAGAACAATGTTACTGGTCTTCTTCATCCTGTTGGACATCCGGGGAATGATGTTCTTGCACAGAATCTCCGGTTTTTACTCAAAAACCAGTTGGCAAGGAAGCAAATGGGGGTGGAAGGAAGAAAGAAGGTGCAGAAGATGTATTTGAAGCAACACATGTATAAGAATTTTGTAGAGGTTATTACTAGGTGCATGAGAAGCAAATAA 2106 0.4169 MEESINRGEYQPNLAKQSSLRLGGSFKSTLSGRSNPRNSPSFRRLNSVRTPRKEGRISVGGALWFRSNHLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNTDAEQIQRRDLLASDKSLSANNETGADIAGISKTISVALAKKDNDVPSHRKTSSKKRSKSRRSSKGKSRGKLKPTTEIKNTDIEEQEPEIPTTNNTYGLLVGPFGPMEDRILEWSPEKRSGTCNRKEDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSRKGGLMSELARRRIKVLEDKSDLSFKTAMKADLVIAGSAVCASWIEQYIDHFPAGASQVAWWIMENRREYFDRSKDILHRVKMLVFLSESQSKQWQKWCEEESIKLRSLPEIVALSVNEELAFVAGIPSTLNTPSFSTEKMVEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGQLQDDKKMKKVSNIKEGLSSLTRKHRIRKLLPLMKNGKVASNSISSNSLSRRKQVLPNGKGTIQQSLKLLIGSVRSKSNKADYVKSLRSFLEQHPNASTSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAYGLPVLGTDAGGTREIVENNVTGLLHPVGHPGNDVLAQNLRFLLKNQLARKQMGVEGRKKVQKMYLKQHMYKNFVEVITRCMRSK 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03224 701 MobiDBLite consensus disorder prediction 27 50 - -
Gma13g03224 701 MobiDBLite consensus disorder prediction 181 197 - -
Gma13g03224 701 MobiDBLite consensus disorder prediction 153 209 - -
Gma13g03224 701 MobiDBLite consensus disorder prediction 27 46 - -
Gma13g03224 701 CDD GT4_PimA-like 250 694 - -
Gma13g03224 701 MobiDBLite consensus disorder prediction 163 180 - -
Gma13g03224 701 Pfam Glycosyl transferases group 1 548 675 IPR001296 GO:0016757
Gma13g03224 701 Gene3D Glycogen Phosphorylase B; 421 681 - -
Gma13g03224 701 PANTHER BNAA05G14870D PROTEIN 1 701 - -
Gma13g03224 701 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
Gma13g03224 701 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 255 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03224 Gma-Chr13 46316735 46321461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03224 18 699 Glycosyltransferase AT3G15940 62.518 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03224 - - gmx:100795000 1312.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03224 13 46316735 46321461 Gma13g03224 13 46316735 46321461 ECH
Gma13g03224 13 46316735 46321461 Gma15g00130 15 1098863 1106407 GST
Gma13g03224 13 46316735 46321461 Gma08g01900 08 17063321 17066857 PCT
Gma08g01900 08 17063321 17066857 Gma13g03224 13 46316735 46321461 PCT