Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01900 ATGGAAGATTGCAACAACAAAGGAGAAGTTCATGCACATTTAACTAAGcagaagcaatcttcatcaagatcagctatcagtTTGAAAGCTACGTTATCTGGAAGATTATCTCCACAACATTCTCCTTCATTTCAGCGACCATATTCTACCTTGGCAGCAAGAAGAGAAAGCAACCGGTTACTGTTGTGGCTGCTTCTGATTACACTTTGGGCTTATCTTGGATTTTGTGTTCAGTCAAGGTGGGCACATGATGATAAGGAAGGAGAATTTTCAGGCTTTGGAAGCAGCCAAGGTGATACAAGTAAAACAAACTATTATGCTGAACAGAATCAGCATCATGATTTGATTGCCAAGAACATTTCCTTATCTGTTAATATCAAATTAGTTGAGAACAAAACAATTGATGTGTCTTTGGCCAATAAAGAATACAGTGTTCTATCTCAACTCAAGGCTAGCTCAAAGAAAAGGAACAGAAGAAAGCGATCAACACATGCTTTGCGAGGTAAGAGGAGGCGAAAACATATACTCCTTGAAAGCAGTGGTATAGAGGAGCAAGAGCCAGAAATTCCCCTAAGGAATGATACCTATGGATTCCTTGTTGGTCCATTTGGTTCAATAGAGGATAGAATTCTGCAATTGAGTCCTCAGAGGCGTTATGAAACCTGTGACAAGAAGGGGGAATTTGCGCGCCTTGTTTGGTCAAGAAGGTTTGTTTTGATATTTCATGAGCTTTCCATGACAGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGGAGCTTCTGTTTCAGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTTGCTAGGAGACGAATCAAGGTGCTTGATGACAAGGCATATCTCAGCTTCAAAATTGCAAAAAAGTCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACATTTCCCCGCTGGTGCAAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGGGCAAAGGATGTGTTGCAGAGAGTGAATACATTGGTTTTTCTGTCTGAATCACAATCTAGGCAATGGCAAAAATGGTGTGAAGAAGAAGGCATAAAACTGAGCTCTCAGCTTGCAATTGTTCCATTGTCTGTTAATGATGAACTAGCTTTTGTAGCTGGCATTCCCTCTACACTTAATGCTCTATCCTTCAGTGCTGCAAAAATGGATGAGAGGAGGAAGTTGTTGCGAGATTCTGTCCGAAGAGAAATGGCATTGAATGATAATGATATGCTTGTTATGACTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTATTGCTTCTCGAATCAGCACACTCAATAGTAGAACATGGACCATTGCAAGATGATGATAAGAAAATGCAAAAGTCATCAGATGATGGAGAATACCTATCTACCTTGGCTAGAAGACATCATTTTAGAAACTTGTTGAAGGATAACAGTGTAGCCTTGAACAATATCTCAAGCAATTTTATAAACAGAACAAGGAAAGTGTTCTCCCAGAACAATGGAACAATAGCACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGTAACAAGGTGGATTATGTTAAAGGTCTTCTAAGTTTTTTAGCACGGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACCTCAGCCACAATACGTGTTGCCGCACTTTACTTTGCAGCAGATGTTTATGTCATAAACTCTCAGGGATTGGGAGAAACATTTGGACGGGTGACTATAGAAGCCATGGCATTTGGTCTTCCGGTGCTTGGAACAGATGCTGGTGGAACACAAGAAATTGTTGAGCATAATGTGACAGGTCTTCTTCATCCTATTGGACGCGCGGGGAATCATGTCCTTGCACAGAATCTCCGGTTTTTACTTGAAAACCGGTTGACAAGAGAACAAATGGGAATGGAAGGAAGAAAAAAGGTGCAGAGGATGTTCTTGAAGCAGCACATGTATGAGAAATTTGTAGAGGTTCTTGTCATGTGCATGAGAAGGATATAA 2064 0.4046 MEDCNNKGEVHAHLTKQKQSSSRSAISLKATLSGRLSPQHSPSFQRPYSTLAARRESNRLLLWLLLITLWAYLGFCVQSRWAHDDKEGEFSGFGSSQGDTSKTNYYAEQNQHHDLIAKNISLSVNIKLVENKTIDVSLANKEYSVLSQLKASSKKRNRRKRSTHALRGKRRRKHILLESSGIEEQEPEIPLRNDTYGFLVGPFGSIEDRILQLSPQRRYETCDKKGEFARLVWSRRFVLIFHELSMTGAPLSMMELATELLSCGASVSAVVLSRKGGLMQELARRRIKVLDDKAYLSFKIAKKSDLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRAKDVLQRVNTLVFLSESQSRQWQKWCEEEGIKLSSQLAIVPLSVNDELAFVAGIPSTLNALSFSAAKMDERRKLLRDSVRREMALNDNDMLVMTLSSINRGKGQLLLLESAHSIVEHGPLQDDDKKMQKSSDDGEYLSTLARRHHFRNLLKDNSVALNNISSNFINRTRKVFSQNNGTIAQSLKILIGSVGSKSNKVDYVKGLLSFLARHSNLSKSVLWTSATIRVAALYFAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRAGNHVLAQNLRFLLENRLTREQMGMEGRKKVQRMFLKQHMYEKFVEVLVMCMRRI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01900 687 MobiDBLite consensus disorder prediction 1 24 - -
Gma08g01900 687 MobiDBLite consensus disorder prediction 152 169 - -
Gma08g01900 687 MobiDBLite consensus disorder prediction 149 169 - -
Gma08g01900 687 PANTHER BNAA05G14870D PROTEIN 1 686 - -
Gma08g01900 687 Pfam Glycosyl transferases group 1 550 661 IPR001296 GO:0016757
Gma08g01900 687 Gene3D Glycogen Phosphorylase B; 410 667 - -
Gma08g01900 687 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 240 679 - -
Gma08g01900 687 CDD GT4_PimA-like 236 680 - -
Gma08g01900 687 MobiDBLite consensus disorder prediction 1 16 - -
Gma08g01900 687 Pfam Glycosyl-transferase family 4 233 402 IPR041693 -
Gma08g01900 687 PANTHER BNAA05G14870D PROTEIN 1 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01900 Gma-Chr8 17063321 17066857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01900 27 685 Glycosyltransferase AT1G52420 57.500 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01900 - - gmx:100793124 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01900 08 17063321 17066857 Gma08g01900 08 17063321 17066857 ECH
Gma13g03224 13 46316735 46321461 Gma08g01900 08 17063321 17066857 PCT
Gma15g00130 15 1098863 1106407 Gma08g01900 08 17063321 17066857 PCT
Gma08g01900 08 17063321 17066857 Gma13g03224 13 46316735 46321461 PCT
Gma08g01900 08 17063321 17066857 Gma15g00130 15 1098863 1106407 PCT