Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03211 ATGCGATTCTCAAAAGCTTCCTTCTACACTCTTCTTCTCCGCAAACCTCATAACCATCACCATCAAAACTACGTCGTTTTATCGCGGCGTCGCGTAGTGACCTTGGCAGTGGGTGTGTTGATCTTGCTGAGTGCTCTCTACATTTTCTGGCCATCGGGTCCTGATCTGAAGATCGTGGGGCTGAAACTGAGGCGCATAAAGGTGCACCCTGTGCCGCCAATCACCATAGACATCTCCATGCTTCTCACGCTGAGGGTGCACAACGTTGACGTCTACTTCATGGACTTCGGAGCGGTTAACGTCGCCGTCGCCTACAGGGGGAAGATGCTGGGCCACGTGACGTCCAGGCGCATGCACGTGAGGGCCAGGGGGTCTTCCTACGTGGATGCTGACGTGGAATTTGCTGGCATCAGCGTGCTACCGGAGCTTGTGTTGCTGCTGGAGGACGTGGCCAGAGGTATCGTACCCTTTGATACCATTAGCCATGCTAAGGGCCAATTGGGCCTTCTCTTCTTTCACTTCCCCATCAAGGCAAAACTATCGTGTGAGGTTGTGGTCAGTATAATAAACCAGACCATTGTTCGTCAACATTGTCTCCACGAGTGA 606 0.5281 MRFSKASFYTLLLRKPHNHHHQNYVVLSRRRVVTLAVGVLILLSALYIFWPSGPDLKIVGLKLRRIKVHPVPPITIDISMLLTLRVHNVDVYFMDFGAVNVAVAYRGKMLGHVTSRRMHVRARGSSYVDADVEFAGISVLPELVLLLEDVARGIVPFDTISHAKGQLGLLFFHFPIKAKLSCEVVVSIINQTIVRQHCLHE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03211 201 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 200 - -
Gma13g03211 201 PANTHER EXPRESSED PROTEIN 10 200 - -
Gma13g03211 201 SUPERFAMILY LEA14-like 39 149 - -
Gma13g03211 201 Pfam Late embryogenesis abundant protein 83 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03211 Gma-Chr13 46212545 46214172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03211 - - gmx:100792375 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03211 13 46212545 46214172 Gma13g03211 13 46212545 46214172 ECH
Gma13g03211 13 46212545 46214172 Gma08g01890 08 16986559 16994305 PCT
Gma08g01890 08 16986559 16994305 Gma13g03211 13 46212545 46214172 PCT