Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01890 ATGGTGAAGGCATTCTCATCAAACTGCGTGGTTTTGAGACGGTTTTGCTGCCTGAAATGGACGGTGTTTGTGGTGGTGTCTCTGGCGGGCGTGTTGGTGTTATGGCCGTGGGAGCCAGAGTTGAAGATCGAGAGAATGAACGTGAAGCGCGTGAAGGTGCACCCTATACCGCCGGTGAGCGCGGACGTGTGGATATCGCTGTCGGTGAGGGTACAGAACCGCTGCATGTACTGGATGGAGCTGACGGACGTTGACGTAGGGGTGAAGTACAGGGGGAAGAAGATGGGTCACGTGGAGTCGGAGGGGTGGCACGTGAGGGGGTGGGCGTCGACGAAGGTGGACGGCGTGCTTGAGTTCAGTGGCCTTCCATCGTCGGAGGTGGCGCATTTGCTGCAGGACCTTGCCATGGGTAAGATCTACTTCCATACCGTTATCAAGGTCTACGGCCAACTTGGCTTTCTCTTGTTTCGCATCCCTCATTTTCTCCAGACAATACTGGCATGTGAGATCTTGGTCAATACAAAAAACCATTCAATTATTCTTCAACACTGTCTTCACAAGGACTAA 567 0.5326 MVKAFSSNCVVLRRFCCLKWTVFVVVSLAGVLVLWPWEPELKIERMNVKRVKVHPIPPVSADVWISLSVRVQNRCMYWMELTDVDVGVKYRGKKMGHVESEGWHVRGWASTKVDGVLEFSGLPSSEVAHLLQDLAMGKIYFHTVIKVYGQLGFLLFRIPHFLQTILACEILVNTKNHSIILQHCLHKD 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01890 188 PANTHER EXPRESSED PROTEIN 15 187 - -
Gma08g01890 188 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01890 Gma-Chr8 16986559 16994305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01890 - - gmx:100815479 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01890 08 16986559 16994305 Gma08g01890 08 16986559 16994305 ECH
Gma13g03211 13 46212545 46214172 Gma08g01890 08 16986559 16994305 PCT
Gma08g01890 08 16986559 16994305 Gma13g03211 13 46212545 46214172 PCT