Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03177 ATGGAGAGTGGGAATTTAACCAGAAGCATAAGTAGGAGCTTAAGCAGGTCAAGTTGGAGAATGGAGGGTGTGTTTGCAAGTGGGAGATATTCTCGAAGGACTTCAAATGTTGATGAGGATGAAGAGGCTCTCAAGTGGGCTGCCATAGAGAGATTGCCAACCTATGACAGGCTAAGAACAAGTATCCTCCAAACATTTGTGGAGGCTGGTCATGATCATGCTGATGCTCGTCCAAGCACATTGCAACACAGGGAAGTTGATGTTCGAAAGTTGGATGTCAATGAAAGGCAAGAGTTTATTGACAGAATCTTCAAGGTAGCTGAAGAAGACAATGAAAAGTACTTGCGCAAATTCAGAAACAGACTTGATAAGGTTGGTATCCGACTCCCAACAGTAGAAGTGAGGTATCAAAATTTGACTGTAGAGGCTGATTGCTACATTGGCAGCAGAGCTCTGCCAACCTTACCAAACGTTGCATTGAACATTGCTGAATCAGCTCTTGGATTATGTGGGATTAGTACCGCAAAGAGGACAAAGCTCACAATTCTTAAAAATGTCTCCGGCATTATTAAGCCTTCAAGGATGGCCCTTTTGCTTGGTCCCCCTTCTTCAGGGAAAACAACCCTTTTGCTGGCCTTGGCTGGAAAATTGGACAATGATTTGAGGGTTAATGGAGAAATCTCCTACAACGGGCACAAGCCTAACGAGTTTGTCCCTAGAAAGACTTCAGCCTACATTAGCCAAAATGATGTGCATATAGGAGAAATGACCGTAAAAGAAACCCTTGATTTCTCAGCTAGATGCCAAGGAGTTGGAACGAGATATGACCTATTAGCCGAGCTAGCTCGAAGGGAAAAGGAAGCTGGAATATTTCCAGAGGCAGAACTTGACCTTTTCATGAAGgctactgcaatggaaggaacagaaagcagtctcattactgcctatacactcaaaatattggggcttgatatttgcaaagataccattgtgggtgatgaaatgcagagaggtgtatctggtggccaaaagaagcgtgtaaccacagGGGAAATGATCGTTGGGCCCACAAAAACATTGTTCATGGATGAAATATCAACGGGACTTGATAGCTCCACAACATATCAAATTGTGAAATGCTTCCAACAAATTGTACACCTCACTGAAGCAACCATATTCATGTCCCTACTCCAACCTGCTCCAGAGACGTTCGATCTCTTTGATGATATCATCTTAATATCGGAGGGTCAGATTGTTTATCAGGGCCCACGTGACCACATCGTTGAGTTCTTTGAATCTTGTGGCTTTAAATGTCCTGAAAGAAAGGGAACAGCAGATTTCTTACAGGAGGTTACTTCAAGGAAAGATCAAGAACAATATTGGGCAAATAGAAGCTTATCATACCGTTATGTCACAGTGAGCGAGTTTGCAAATAGATTCAAGCAATTTCATGTTGGAATAAAGCTTGAGAATGAGCTTTCTGTGCCATTTGATAAATCAAGGGGACATAGAGCGGCTCTTGTTTTCAAGAAATATACAGTGCCCACAATGGGACTTCTTAAAGCATGTTGGGACAAGGAATGGCTACTAATAAAGAGGAATGCTTTTGTCTATGTATTTAAGACAGGTCAAATAGTCATTATTGGTATCATAGCTGCAACTGTGTTCTTTAGGGCCAATATGCATCAAAGGAATGAGGCTGATGCCGCAGTTTACATAGGCTCAATTTTGTTTACCATGATCATGAACATGTTCAATGGTTTTGCTGAGTTACCACTCACGATTGCAAGACTTCCTATATTCTACAAGCACAGAGACCACCTTTTCCATCCTCCTTGGACTTACACTCTCCCTAATTTCATCCTACGGATCCCCATTACTATGTTTGAGGCTATTGTTTGGGTACTTATCACATACTACACAATAGGATTAGCACCTGAAGCTAGCAGGTTCTTCAAGCACTTGTTGCTAGTTTTTCTTGTCCAGCAAATGGCAGCTGGGATGTTTAGGTTCATATCTGGAGTTTCTAGGACAATGATTATTGCTAACACTGGTGGATCCCTCATGCTCCTCCTTGTTTTTTTACTTGGAGGTTTCATCCTTCCTAAAAGTTCCATTCCAAATTGGTGGATATGGGGCTACTGGATATCACCACTAACATATGGATTCAATGCTTTTACTGTGAATGAATTATTTGCTCCAAGGTGGAGCAATTTGTCTTCAGATGGTAGAACCCCGATCGGTATAGCTACATTAAATAACTTCGATGTTTTTACTGAGAAACGATGGTACTGGATTGGTGCAGCTACTCTTTTGGGTTTCATTATCTTGTACAATGTTCTCTTCACCTTTGCACTTATGTACCTTAATCCTATTGGAAAAAAACAAGCAATTGTATCTGAAGAAGAAGCAAGTGAAATGGAAGCTGAAGGAGACTTTAGAAAAGATCCTAGACTTTTAAAGCCAGAGCCCAACAGAGAGATAGCCCTTCAATCATTATCTTCTACTGATGGGAACAACACACGAGAAGTGGCAATGCAACAAATGAGTAACCGAGGTAATCCTAGTGGAATAAGAAGTGTTGATTCAATGCATGAATCAGCCACTGGAGTTGCCCCTAAGAGAGGAATGGTTCTACCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTATTATGTGGACATGCCTGCTGAAATGAAAGGGCAAGGAGTGACAGATGATAGGCTACAATTACTTAGGGAAGTTACTGGTGCCTTTAGGCCTGGAGTTTTAACTGCTTTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCAGGGAGAAAGACAGGTGGCTACATTGAAGGAGATGTTAGAATATCTGGCTTCCCCAAGAACCAAGAAACATTTGCACGAATTTCTGGTTATTGTGAGCAAACTGATATCCATTCACCCCAAGTTACTGTTCGAGAATCTTTGATCTATTCTGCTTTCCTTCGATTGCCTATAGAGGTCAATAATGAGGAAAAAATGAAATTTGTTGACGAAGTAATGGAGTTGGTTGAGCTAAATAATCTCAAGGATGCTATAGTTGGGCTTCCAGGTGTTACAGGGTTGTCAACCGAACAAAGAAAAAGGCTAACAATTGCTGTTGAACTCGTCGCTAATCCGTCAATCATTTTCATGGATGAACCAACTTCAGGTCTCGATGCAAGAGCAGCAGCCATTGTAATGAGGACTGTGAGAAATACTGTTGACACTGGAAGAACAGTTGTATGCACAATTCACCAACCTAGTATCGATATCTTTGAAGCCTTTGACGAGTTGTTGTTGATGAAGAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGAAGGAATTCACTTAGGATTATAGAATATTTTGAGGCAATCCCAGGGGTCCCAAAAATTAAGGATAAGTACAACCCAGCTACATGGATGTTAGAGGTTAGCTCTATAGCAGCTGAAGTTCGACTTCGAATGGATTTTGCTGAGCACTACAAATCATCATCTTTGTATCAGCGAAACAAAGCTCTAATAAGGGAGTTAAGTACTAGTCCTCCAGGAGTAAAAGATTTGTACTTCCCCACTCAATATTCTCAATCCACTTGGGAACAGTTCAAATCTTGTTTATGGAAACAACGGTTGACTTACTGGAGGAGTCCAGATTATAACCTTGTCAGGTTTTTCTTCACTTTAGCTGCAGCTTTCTTGGTGGGGACGGTATTTTGGAGGGTTGGCAAAAACAGGGGTAACTCAGGCGATCTGACTACTATTATAGGAGCATTGTATGGTTCAGTTTTTTTTGTAGGTGTTAACAATTGCCAAACTGTTCAACCAGTAGTAGCCGTTGAAAGAACGGTATTTTATCGAGAAAGAGCTGCTGGGATGTATTCTGCTTTGCCTTATGCCATTGCACAGGTTATTTCTGAAATACCATATCTATTTGTTCAAACTATATGTTTCTCATTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTAGCCAAGGTCCTTTGGTTTTTCTTTGTAAGTTTCTTTTCCTTCATGTACTTCACATACTATGGGATGATGACTGTTTCCATTACACCAAACCACCAAGTTGCATCAATCCTTGGAGCAGCATTCTACGGAATCTTCAATCTATTTTCTGGTTTTTTTATCCCAAGACCAAAAATTCCTAAATGGTGGGTTTGGTATTATTGGATTTGCCCAGTAGCGTGGACTGTGTATGGGTTAATTGTCTCACAATATGGAGATGTAGAGATAGAGATTAGTGTGCCTAGTGCGAATAACCAAACTATCAAGCATTATATTGAAGAACATTATGGGTTTAAACCAGACTTCATGGGACCAGTTGCCGCTGTTTTGGTCGCTTTTCCAGTCTTCTTTGCCTTTGTATTTGCCTTCGCAATCAAAACACTAAACTTCCAAACGAGATAA 4464 0.3949 MESGNLTRSISRSLSRSSWRMEGVFASGRYSRRTSNVDEDEEALKWAAIERLPTYDRLRTSILQTFVEAGHDHADARPSTLQHREVDVRKLDVNERQEFIDRIFKVAEEDNEKYLRKFRNRLDKVGIRLPTVEVRYQNLTVEADCYIGSRALPTLPNVALNIAESALGLCGISTAKRTKLTILKNVSGIIKPSRMALLLGPPSSGKTTLLLALAGKLDNDLRVNGEISYNGHKPNEFVPRKTSAYISQNDVHIGEMTVKETLDFSARCQGVGTRYDLLAELARREKEAGIFPEAELDLFMKATAMEGTESSLITAYTLKILGLDICKDTIVGDEMQRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPRDHIVEFFESCGFKCPERKGTADFLQEVTSRKDQEQYWANRSLSYRYVTVSEFANRFKQFHVGIKLENELSVPFDKSRGHRAALVFKKYTVPTMGLLKACWDKEWLLIKRNAFVYVFKTGQIVIIGIIAATVFFRANMHQRNEADAAVYIGSILFTMIMNMFNGFAELPLTIARLPIFYKHRDHLFHPPWTYTLPNFILRIPITMFEAIVWVLITYYTIGLAPEASRFFKHLLLVFLVQQMAAGMFRFISGVSRTMIIANTGGSLMLLLVFLLGGFILPKSSIPNWWIWGYWISPLTYGFNAFTVNELFAPRWSNLSSDGRTPIGIATLNNFDVFTEKRWYWIGAATLLGFIILYNVLFTFALMYLNPIGKKQAIVSEEEASEMEAEGDFRKDPRLLKPEPNREIALQSLSSTDGNNTREVAMQQMSNRGNPSGIRSVDSMHESATGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKGQGVTDDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTVRESLIYSAFLRLPIEVNNEEKMKFVDEVMELVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSLRIIEYFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLRMDFAEHYKSSSLYQRNKALIRELSTSPPGVKDLYFPTQYSQSTWEQFKSCLWKQRLTYWRSPDYNLVRFFFTLAAAFLVGTVFWRVGKNRGNSGDLTTIIGALYGSVFFVGVNNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQVISEIPYLFVQTICFSFIVYAMVSFEWKVAKVLWFFFVSFFSFMYFTYYGMMTVSITPNHQVASILGAAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEIEISVPSANNQTIKHYIEEHYGFKPDFMGPVAAVLVAFPVFFAFVFAFAIKTLNFQTR 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03177 1487 Gene3D - 900 1128 IPR027417 -
Gma13g03177 1487 Pfam ABC-2 type transporter 1211 1425 IPR013525 GO:0016020|GO:0140359
Gma13g03177 1487 Pfam ABC-2 type transporter 520 731 IPR013525 GO:0016020|GO:0140359
Gma13g03177 1487 Pfam ABC-2 type transporter 1095 1156 IPR043926 GO:0140359
Gma13g03177 1487 Pfam ABC-2 type transporter 398 451 IPR043926 GO:0140359
Gma13g03177 1487 CDD ABCG_PDR_domain1 176 422 IPR034001 -
Gma13g03177 1487 Pfam ABC-transporter N-terminal 97 158 IPR029481 -
Gma13g03177 1487 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1487 - -
Gma13g03177 1487 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1487 - -
Gma13g03177 1487 Pfam Plant PDR ABC transporter associated 736 799 IPR013581 -
Gma13g03177 1487 Gene3D - 170 479 IPR027417 -
Gma13g03177 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Gma13g03177 1487 CDD ABCG_PDR_domain2 883 1121 IPR034003 -
Gma13g03177 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 167 440 IPR003439 GO:0005524
Gma13g03177 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 905 1122 IPR027417 -
Gma13g03177 1487 Pfam ABC transporter 183 365 IPR003439 GO:0005524
Gma13g03177 1487 Pfam ABC transporter 914 1066 IPR003439 GO:0005524
Gma13g03177 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 886 1138 IPR003439 GO:0005524
Gma13g03177 1487 SMART AAA_5 192 417 IPR003593 -
Gma13g03177 1487 SMART AAA_5 923 1115 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03177 Gma-Chr13 45913607 45924404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03177 K08711 - gmx:100801386 2902.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03177 13 45913607 45924404 Gma13g03177 13 45913607 45924404 ECH
Gma13g03177 13 45913607 45924404 Gma15g00188 15 1495538 1505957 GST
Gma13g03177 13 45913607 45924404 Gma07g00151 07 1281714 1290089 PCT
Gma13g03177 13 45913607 45924404 Gma08g01847 08 16584229 16594156 PCT
Gma07g00151 07 1281714 1290089 Gma13g03177 13 45913607 45924404 PCT
Gma08g01847 08 16584229 16594156 Gma13g03177 13 45913607 45924404 PCT