Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01847 ATGGATGGGAATAATTTCagcagaagcataagcaggagcataagcaggTCAAGTTGGAAAATGGAGGAAGTGTTTGCGAGTGGAAGGTATTCTCGCAGGACTTCACATGTGGATGAGGATGAGGAGGCTCTCAAATGGGCTGCCATAGAGAAACTTCCCACCTATGATAGGCTAAGAACAAGTATCATCCAAACCTTTGCCGAGGGCGATCAAGCCGGTGTGCACAAGGAAATCGATGTTCGGAAGTTAGATGTGAATGATAGGCAACAAATCATTGACAAGATTTTCAAGGTTGCTGAAGAAGATAATGAAAAGTTCCTCAAGAAGTTCAGAAACAGAATTGACAAGGTTGGAATTCGACTTCCAACAGTAGAAGTGAGGTTCCAAAATTTGACTGTTGAGGCAGATTCCTATGTCGGCAGCAGAGCTCTACCAACCCTACCAAATGTTGCACTGAACCTTCTTGAATCAGCTCTTGGCATTTTTGGCATTAGTACAGCTAAGAGAACAAAGCTCACAATTCTTAAGAATACCTCTGGCATTGTTAAACCATCAAGGATGGCCCTTCTACTAGGACCCCCGTCTTCAGGGAAAACGACCCTTTTGTTGGCATTGGCTGGAAAATTGGACTCCGAATTGAGGGTAAAAGGAGAAATCACATACAATGGACATAAACTTAATGAGTTTGAGCCTAGAAAAACTTCAGCATACATTAGCCAAAATGATGTTCATGTTGGAGAAATGACTGTAAAAGAAACACTGGATTTCTCAGCTAGATGTCAAGGAGTTGGGACTCGATATGACCTATTAACCGAGCTTGCTAGAAGGGAGAAGGAAGCCGGCATATTCCCAGAGGCAGATGTTGACCTTTTCATGAAGGCAACTGCTATGGAAGGGACAGAAAGCAGTCTCATTACCGACTACACACTCAAAATATTGGGGCTTGATATTTGTAAGGATACCATAGTGGGTGATGAAATGCACAGAGGGGTATCCGGTGGCCAAAAGAAGCGTGTCACTACAGGAGAGATGATTGTAGGGCCCACAAAAACACTATTCATGGATGAAATATCAACGGGTCTTGATAGCTCAACAACATATCAGATTGTGAAGTGCTTGCAGCAGATTGTGCACCTTAATGAAGGAACTATCTTAATGTCCCTTCTCCAACCTGCTCCTGAGACCTTCAATCTCTTTGATGACATCATCCTCATATCAGAGGGCCAGATTGTGTATCAAGGCCCTCGTGAGCACATTGTGGAATTCTTTGAATCCTGTGGGTTCCGCTGTCCCGAAAGAAAGGGAACCGCTGATTTCTTGCAAGAGGTTACCTCAAGGAAGGACCAAGAGCAGTATTGGGCAGACAAAAACATGCCATACCGTTATGTTACAGTGACTGAATTTGCAAACAAGTTCAAGAGATTCCATGTTGGAATAAGGCTTGAGAGCGAGTTGTCTGTGGCATTTGACAAGTCAAGTGCACACAAAGCAGCTCTTGTATATAGTAAAAACTCTGTGCCAACAATGGACCTTTTCAAAGCATGTTGGGACAAGGAGTGGCTTCTGATCAAGAGGAACTCCTTCGTCTACATATTCAAGACAGCCCAAATAATCTTCATTGCCTTCATAGCCGCGACACTGTTCTTGAGGACTGAAATGCACCGGAAAAATGAAGATGATGCTGCACTCTACATTGGTGCAATTTTGTTCACCATGATCATGAACATGTTCAATGGTTTTGCTGAGCTAGCACTCACAATTGGAAGGCTTCCCGTGTTTTACAAGCACAGAGACCACCTTTTCCACCCTGCTTGGACTTACACCCTCCCCAATTTCTTGTTGCGTATTCCCATTTCTGTGTTTGAGTCTCTTGTTTGGGTTGGTGTCACCTACTACATCATAGGATTTGCTCCTGATGCCAGCAGGTTCTTCAAGCAATTGTTGTTGGTGTTTCTGATCCAACAAATGGCAGCTGGGATGTTTAGGGTCATTTCTGGAGTGTGCAGGACAATGATTATAGCTAACACTGGAGGAGCCCTCATGCTCCTTCTTGTTTTCCTACTTGGAGGCTTCATCCTTCCAAAACGTGAAATTCCTGATTGGTGGGTGTGGGCTTACTGGGTGTCACCATTGACATACGGCTTTAATGCCTTGTCTGTGAATGAAATGTTAGCTCCAAGGTGGATGCATCCACAGACTTCTTCTGATAAAAATACCACATTGGGTCTATCAGTACTAAGGAACTTTGATGTTTATGCTAAAAAAGATTGGTACTGGATTGGAGCTGCTGCTCTTCTTGGTTTCACAGTTCTGTACAACGTTCTCTTCACCCTTGCGCTTATGTACCTTAACCCTCTTGGAAAGAAACAAGCAATTATTTCTGAGGAAGATGCAAGTGAAATGGAGTCTGGAGGAGACACCAATGAAGAACCCAGACTTGTAAGGCCCCCATCAAACAGAGAATCAATGCTTCGATCATTATCTACTGCTGATGGAAACAATTCAAGAGAAGTGGCAATGCAGCGAATGGGTAGCCAAGCTACCAGTGGATTAAGAAAAGTTGAGTCGGCAAACGATTCAGCTACTGGAGTTGCCCCCAAAAAAGGAATGATTTTACCTTTCCAACCACTTGCAATGTCCTTTGACACTGTTAATTACTACGTCGACATGCCTGCAGAAATGAGAGATCAAGGAGTGACAGAAGATAGGCTACAACTGCTTAGGGGAGTAACTAGCTCCTTTAGGCCTGGAGTCCTAACTGCACTAATGGGAGTTAGTGGCGCTGGGAAGACAACTTTAATGGATGTTTTAGCAGGAAGAAAGACGGGTGGCTACATTGAAGGAGATATTAGAATCTCGGGGTTCCCTAAGAACCAAGAAACCTTTGCAAGAGTCTCTGGTTACTGTGAACAAACTGATATTCATTCACCCCAAGTTACTATTAGAGAATCTTTGCTTTACTCAGCCTTCCTCCGGTTACCAAAAGAAGTTAGCAAGGAGGAAAAAATACAATTTGTGGACCAAGTGATGGATTTGGTAGAGTTAGATAATCTCAAGGATGCTATAGTGGGGCTTCCAGGAGTTACTGGGTTGTCAACCGAACAACGAAAGAGGCTGACCATCGCTGTTGAGCTTGTTGCTAATCCTTCAATTATTTTCATGGATGAACCCACTTCTGGTCTTGATGCAAGAGCAGCAGCTATTGTTATGAGGACTGTGAGAAACACTGTGGACACTGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGCATTGATATCTTTGAAGCCTTTGATGAGCTTTTGTTGATGAAAAGAGGAGGACAAGTGATCTACTCAGGACCATTAGGCCGAAATTCCCACAAGATTACGGAATACTTTGAGGCAATTCCAGGGGTCCCAAAAATTAAAGAGATGTACAACCCAGCAACATGGATGCTAGAAGTGAGTTCTGTAGCAGCTGAAGTTCGTCTTGGAATGGACTTTGCTGAATACTACAAAACATCATCTTTATTCCAGCGAAACAAAGCTCTTGTAAAGGAGTTAAGCACACCCCCGCCTGGAGCTACTGATTTGTATTTCCCCACCAAGTATTCTCAATCCACATTGGGGCAATTTAAATCCTGTTTTTGGAAGCAGTGGCTGACATACTGGAGGAGTCCAGATTATAATCTCGTCAGATATTTTTTCACCTTGGCTTGTGCCCTCATGATAGGGACAGTATTTTGGAGAATTGGCAAAAACAGGGAGAGCTCAGCTGATCTGACAATGATTATAGGAGCAATGTATGCTGCTGTTATTTTTGTTGGGATTAACAATTGTCAAACTGTTCAACCAATTGTAGCCGTTGAAAGAACAGTGTTCTATCGAGAAAGAGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCTTAGCACAGGTCTTTTGCGAAATACCATATGTGTTTTTCCAAACTGTTTATTACTCACTCATAGTGTATGCAATGGTGAGCTTTGAATGGAAAGTGGAGAAGTTCTTTTGGTTCTTCTTTGTCAGCTTCTTCTCTTTCTTGTACTTCACATATTATGGAATGATGACTGTGTCCATCACACCAAACCACCAAGTGGCATCAATCTTTGCAGCAGCATTCTATGGACTCTTTAATCTCTTCTCTGGTTTCTTTATCCCAAGACCGAAAATTCCTAAATGGTGGGTGTGGTATTACTGGATTTGTCCAGTGGCATGGACAGTGTATGGATTAATTGTCTCTCAATATAGAGATATAGAGGACCCACTTTTTGTGCCTGGGAGTACTACTCAAAATTTCACTGTCAAAGGATATATTGAAGACCACTACGGGTTCAAATCCGACTTCATGGGTCCAGTTGCTGCAGTTTTGGTAGCTTTCACTGTCTTTTTTGCCTTTGTATTTTCCTTCTGCATCAAGGCACTGAACTTCCAAACAAGATAA 4449 0.4259 MDGNNFSRSISRSISRSSWKMEEVFASGRYSRRTSHVDEDEEALKWAAIEKLPTYDRLRTSIIQTFAEGDQAGVHKEIDVRKLDVNDRQQIIDKIFKVAEEDNEKFLKKFRNRIDKVGIRLPTVEVRFQNLTVEADSYVGSRALPTLPNVALNLLESALGIFGISTAKRTKLTILKNTSGIVKPSRMALLLGPPSSGKTTLLLALAGKLDSELRVKGEITYNGHKLNEFEPRKTSAYISQNDVHVGEMTVKETLDFSARCQGVGTRYDLLTELARREKEAGIFPEADVDLFMKATAMEGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLNEGTILMSLLQPAPETFNLFDDIILISEGQIVYQGPREHIVEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWADKNMPYRYVTVTEFANKFKRFHVGIRLESELSVAFDKSSAHKAALVYSKNSVPTMDLFKACWDKEWLLIKRNSFVYIFKTAQIIFIAFIAATLFLRTEMHRKNEDDAALYIGAILFTMIMNMFNGFAELALTIGRLPVFYKHRDHLFHPAWTYTLPNFLLRIPISVFESLVWVGVTYYIIGFAPDASRFFKQLLLVFLIQQMAAGMFRVISGVCRTMIIANTGGALMLLLVFLLGGFILPKREIPDWWVWAYWVSPLTYGFNALSVNEMLAPRWMHPQTSSDKNTTLGLSVLRNFDVYAKKDWYWIGAAALLGFTVLYNVLFTLALMYLNPLGKKQAIISEEDASEMESGGDTNEEPRLVRPPSNRESMLRSLSTADGNNSREVAMQRMGSQATSGLRKVESANDSATGVAPKKGMILPFQPLAMSFDTVNYYVDMPAEMRDQGVTEDRLQLLRGVTSSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKNQETFARVSGYCEQTDIHSPQVTIRESLLYSAFLRLPKEVSKEEKIQFVDQVMDLVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKITEYFEAIPGVPKIKEMYNPATWMLEVSSVAAEVRLGMDFAEYYKTSSLFQRNKALVKELSTPPPGATDLYFPTKYSQSTLGQFKSCFWKQWLTYWRSPDYNLVRYFFTLACALMIGTVFWRIGKNRESSADLTMIIGAMYAAVIFVGINNCQTVQPIVAVERTVFYRERAAGMYAPLPYALAQVFCEIPYVFFQTVYYSLIVYAMVSFEWKVEKFFWFFFVSFFSFLYFTYYGMMTVSITPNHQVASIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYRDIEDPLFVPGSTTQNFTVKGYIEDHYGFKSDFMGPVAAVLVAFTVFFAFVFSFCIKALNFQTR 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01847 1482 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1482 - -
Gma08g01847 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 432 IPR027417 -
Gma08g01847 1482 SMART AAA_5 916 1108 IPR003593 -
Gma08g01847 1482 SMART AAA_5 184 416 IPR003593 -
Gma08g01847 1482 MobiDBLite consensus disorder prediction 797 836 - -
Gma08g01847 1482 CDD ABCG_PDR_domain2 876 1114 IPR034003 -
Gma08g01847 1482 Pfam Plant PDR ABC transporter associated 728 793 IPR013581 -
Gma08g01847 1482 Gene3D - 893 1128 IPR027417 -
Gma08g01847 1482 CDD ABCG_PDR_domain1 168 414 IPR034001 -
Gma08g01847 1482 MobiDBLite consensus disorder prediction 821 836 - -
Gma08g01847 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 432 IPR003439 GO:0005524
Gma08g01847 1482 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1482 - -
Gma08g01847 1482 Pfam ABC transporter 907 1059 IPR003439 GO:0005524
Gma08g01847 1482 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Gma08g01847 1482 Gene3D - 162 472 IPR027417 -
Gma08g01847 1482 Pfam ABC-2 type transporter 511 722 IPR013525 GO:0016020|GO:0140359
Gma08g01847 1482 Pfam ABC-2 type transporter 1205 1418 IPR013525 GO:0016020|GO:0140359
Gma08g01847 1482 Pfam ABC-2 type transporter 1088 1148 IPR043926 GO:0140359
Gma08g01847 1482 Pfam ABC-2 type transporter 390 468 IPR043926 GO:0140359
Gma08g01847 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 892 1131 IPR003439 GO:0005524
Gma08g01847 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1116 IPR027417 -
Gma08g01847 1482 Pfam ABC-transporter N-terminal 90 150 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01847 Gma-Chr8 16584229 16594156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01847 K08711 - gmx:100798588 2872.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01847 08 16584229 16594156 Gma08g01847 08 16584229 16594156 ECH
Gma07g00151 07 1281714 1290089 Gma08g01847 08 16584229 16594156 GST
Gma13g03177 13 45913607 45924404 Gma08g01847 08 16584229 16594156 PCT
Gma15g00188 15 1495538 1505957 Gma08g01847 08 16584229 16594156 PCT
Gma08g01847 08 16584229 16594156 Gma13g03177 13 45913607 45924404 PCT
Gma08g01847 08 16584229 16594156 Gma15g00188 15 1495538 1505957 PCT