Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03087 ATGCTGCATATGTTCTCTAAGGCTTCTTCTGCTATGGCCACTTTTCCTTGTTCCAGGGTGAAAAGTGGGTTGTGCGTGTGGCCAGATGTGAGACAACTTTGCTTTAGAAAAGGCATGCTATATGGATTTATGCGGTTGTTTTCTACACCGTTGAAAACGCTCCGTGGAGCTAGCCGCTCGCTGAGAGTGACTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCATTGCAGATTGAATTGgtaccttgcctgaaggacaattatgcttatctgttacatgatgtggacacgggtacagttggtgttGTTGATCCTTCTGAAGCTGTGCCTATCATAGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCATGATCACACGGGTGGAAATGTAGAATTGAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGCATTGATATCCACTTGAATGATGGAGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACGCCTGGTCATACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCCCACAGCAGATGCTATCTTCTCTTAAAAAGATCATGTCTTTGTCAGATGATACAAATATATACTGTGGACACGAGTATACATTGAATAATATAAAGTTTGCATTGTCTATCGAACCTGAAAATGAGGAGCTTCAATCCTATGCTGCCCAAGTAGCTTACCTTCGAAGTAAAGGCCTACCCACGATTCCCACCACACTGAAGGTGGAAAAGGCTTGTAATCCATTCCTTCGTACATCCAGTGCTGCAATCCGGCAATCACTAAAGATTGCAGCCACAGCAAATGATGCAGAAGCCCTTGGTGTCATCCGGCAAGCAAAGGATAATTTTTAG 990 0.4071 MLHMFSKASSAMATFPCSRVKSGLCVWPDVRQLCFRKGMLYGFMRLFSTPLKTLRGASRSLRVTQFCSVANMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVVDPSEAVPIIDALSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPQQMLSSLKKIMSLSDDTNIYCGHEYTLNNIKFALSIEPENEELQSYAAQVAYLRSKGLPTIPTTLKVEKACNPFLRTSSAAIRQSLKIAATANDAEALGVIRQAKDNF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03087 329 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
Gma13g03087 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Gma13g03087 329 PANTHER BETA LACTAMASE DOMAIN 4 329 - -
Gma13g03087 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Gma13g03087 329 Gene3D - 76 329 IPR036866 -
Gma13g03087 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 329 IPR036866 -
Gma13g03087 329 SMART Lactamase_B_5a 86 244 IPR001279 -
Gma13g03087 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Gma13g03087 329 Pfam Metallo-beta-lactamase superfamily 90 244 IPR001279 -
Gma13g03087 329 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03087 Gma-Chr13 45147029 45150742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03087 K01069 - gmx:100816314 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03087 13 45147029 45150742 Gma13g03087 13 45147029 45150742 ECH
Gma13g03087 13 45147029 45150742 Gma15g00275 15 2391691 2395132 GST
Gma13g03087 13 45147029 45150742 Gma12g00454 12 3717953 3721908 PCT
Gma12g00454 12 3717953 3721908 Gma13g03087 13 45147029 45150742 PCT