Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00454 ATGAGTGATGCGAAGGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGAAAGGTCTTCTGTATGGATTTATGCGATTATTTTCAATACCATTAAAAACATTGCGCGGAGCTAGTCGGTCGTTGAGAGTGGATCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgttccatgtcttagggacaattatgcatatcttttacacgatgtggatacggggacagttggtgttGTTGATCCTTCCGAAGCTGCGCCTATCATAGATGCGTTGAGCAAGAAAGATTTAAATTTGACTTACATACTGAACACCAACCACCATCCTGATCACACTGGTGGAAATGCAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCAGAAATAGACAAGGAAAGAATTCCTGGTATTGATATCTATTTGAGTGATGGTGATAACTGGATGTTCGCAGGCCATGAAGTGCATATATTGGCCACACCTGGTCACACCGAAGGTCATGTAAGCTTCTACTTTCCAGGTTCTGGGGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTCTTAGAAGGAACCCCCGAACAGATGCTATCTTCTCTTAAAAGGATCATGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACCTTGAACAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAATCCTATGCTACCCATGTATCTAACCTTAGAAATAAAGGCTTGCCCACGATTCCAACTACGCTGAAAGTGGAAAAGGCTTGCAATCCATTCCTTCGCACATGGAGCATAGAAATCCGGCAAAAACTAAATATTGCAGCCACGGCAGATGATGCAGAAGCCCTGGGTGTTATCCGGCAAGCAAAGGATAATTTTTAG 948 0.3914 MSDAKERSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAAPIIDALSKKDLNLTYILNTNHHPDHTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDGDNWMFAGHEVHILATPGHTEGHVSFYFPGSGAIFTGDTLFSLSCGKLLEGTPEQMLSSLKRIMSLPDDTSIYCGHEYTLNNSKFALSIEPENKELQSYATHVSNLRNKGLPTIPTTLKVEKACNPFLRTWSIEIRQKLNIAATADDAEALGVIRQAKDNF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00454 315 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Gma12g00454 315 PANTHER BETA LACTAMASE DOMAIN 4 315 - -
Gma12g00454 315 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 315 IPR017782 GO:0004416|GO:0019243
Gma12g00454 315 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 315 IPR036866 -
Gma12g00454 315 SMART Lactamase_B_5a 72 230 IPR001279 -
Gma12g00454 315 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 65 315 IPR017782 GO:0004416|GO:0019243
Gma12g00454 315 PIRSF Glx 57 315 IPR017782 GO:0004416|GO:0019243
Gma12g00454 315 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 315 - -
Gma12g00454 315 Gene3D - 62 315 IPR036866 -
Gma12g00454 315 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 315 IPR032282 -
Gma12g00454 315 Pfam Metallo-beta-lactamase superfamily 76 230 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00454 Gma-Chr12 3717953 3721908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00454 K01069 - gmx:100805615 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00454 12 3717953 3721908 Gma12g00454 12 3717953 3721908 ECH
Gma13g03087 13 45147029 45150742 Gma12g00454 12 3717953 3721908 PCT
Gma15g00275 15 2391691 2395132 Gma12g00454 12 3717953 3721908 PCT
Gma12g00454 12 3717953 3721908 Gma13g03087 13 45147029 45150742 PCT
Gma12g00454 12 3717953 3721908 Gma15g00275 15 2391691 2395132 PCT