Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03078 ATGGCGTTGAACAATGGCGTCCCCGCCACCGGCACCGGCCTCATCGTCAGCTTCGGTGAGATGCTCATCGACTTCGTCCCCACCGTCTCTGGCGTGTCCCTGGCCGAGGCCCCTGGCTTCCTCAAGGCCCCCGGCGGCGCCCCCGCTAACGTCGCCATCGCCGTGTCGCGCCTCGGCGGCAAAGCCGCCTTCGTCGGCAAGCTCGGCGACGACGAGTTCGGCCACATGCTCGCCGGAATCCTCAAGGAAAACGGCGTTCGCGCCGACGGCATCAACTTTGACCAGGGCGCACGCACCGCCCTGGCCTTCGTGACCCTACGCGCCGACGGGGAGCGTGAGTTCATGTTCTACAGAAACCCCAGCGCCGACATGCTCCTCAAGCCCGAAGAACTCAATCTCGAACTCATCAGATCTGCAAAAGTTTTCCATTACGGATCAATCAGTTTGATCGTGGAGCCATGCAGATCAGCACACTTGAAGGCAATGGAAGTAGCCAAGGAATCTGGGTGCTTGCTCTCCTATGACCCCAACCTTCGTCTACCTTTGTGGCCTTCGGCTGAGGAAGCTCGTAAGCAAATACTGAGCATTTGGGAGAAGGCTGATTTGATCAAGGTCAGTGATGCGGAGCTTGAGTTCCTCACAGGAAGTGACAAGATTGATGATGAATCTGCTTTGTCATTGTGGCACCCCAATTTGAAGTTGCTCCTTGTCACTCTTGGGGAACATGGTTCCAGATACTACACCAAGAGTTTCAAAGGATCGGTAGATGCTTTCCATGTCAATACAGTTGATACAACTGGTGCCGGTGATTCCTTTGTTGGTGCTTTATTGGCCAAGATTGTCGATGATCAGTCCATACTTGAAGATGAACCAAGGTTAAGAGAAGTACTAAAGTTTGCAAATGCATGTGGAGCTATTACAACTACCCAAAAGGGAGCAATTCCGGCCCTTCCCAAAGAGGAGGCTGCACTGAAACTGATCAAAGGGGGGTCATAG 996 0.5402 MALNNGVPATGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKAAFVGKLGDDEFGHMLAGILKENGVRADGINFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKESGCLLSYDPNLRLPLWPSAEEARKQILSIWEKADLIKVSDAELEFLTGSDKIDDESALSLWHPNLKLLLVTLGEHGSRYYTKSFKGSVDAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLREVLKFANACGAITTTQKGAIPALPKEEAALKLIKGGS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03078 331 SUPERFAMILY Ribokinase-like 15 321 IPR029056 -
Gma13g03078 331 PANTHER BNAA04G18320D PROTEIN 20 318 - -
Gma13g03078 331 Gene3D - 13 330 IPR029056 -
Gma13g03078 331 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Gma13g03078 331 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Gma13g03078 331 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Gma13g03078 331 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Gma13g03078 331 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Gma13g03078 331 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Gma13g03078 331 PANTHER HEXOKINASE FAMILY MEMBER 20 318 - -
Gma13g03078 331 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03078 Gma-Chr13 45100959 45105283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03078 K00847 - gmx:100814192 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03078 13 45100959 45105283 Gma13g03078 13 45100959 45105283 ECH
Gma13g03078 13 45100959 45105283 Gma15g00284 15 2454794 2458266 GST
Gma13g03078 13 45100959 45105283 Gma12g00461 12 3777062 3781450 PCT
Gma12g00461 12 3777062 3781450 Gma13g03078 13 45100959 45105283 PCT