Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00461 ATGGCTTCCACTAATGCTCTTCCTCCCACCGGCAACGGCCTCATCGTGAGCTTCGGCGAGATGCTCATCGACTTCGTTCCCACCGTCTCCGGCGTGTCCCTCGCGGAGGCTCCGGGATTCCTCAAGGCCCCCGGCGGCGCCCCCGCCAACGTTGCCATCGCCGTCGCGAGACTCGGCGGCAAAGCGGCGTTCGTCGGGAAGCTCGGCGACGACGAGTTCGGGCACATGCTGGCCGGAATCCTGAAGGAGAACGACGTGCGATCCGACGGGATCAACTTCGAAAAGGGCGCGCGCACCGCGCTGGCGTTCGTGACCCTACGCGCCGACGGGGAGCGTGAGTTCATGTTCTACAGAAACCCCAGTGCCGACATGCTCCTCACGCCCGAAGATCTCAATCTCGAACTCATCAGATCCGCAAAAGTATTCCATTATGGATCGATAAGCTTGATCGTGGAGCCATGCAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAGGGAAGCAGGGTGCTTGCTCTCTTATGACCCAAACTTGCGGCTACCCTTGTGGCCCTCGGCCGAGGAAGCACGGCAGCAAATACTTAGCATATGGGACAAGGCTGATGTGATCAAGGTCAGTGATGTGGAACTGGAATTCCTAACTGGAAGTGACAAAATTGATGATGCATCGGCTCTCTCCCTGTGGCATCCCAATTTAAAGTTGCTTCTTGTCACTCTTGGAGAACATGGTTCTAGGTACTATACCAAGAATTTCCGTGGATCAGTGGAGGCTTTTCATGTCAACACAGTTGACACAACTGGCGCTGGTGATTCCTTTGTTGGTGCACTATTAAGCAAGATTGTCGATGATCAATCCATACTTGAAGATGAAGCAAGGTTAAGGGAAGTACTCAAGTTTACAAATGCGTGTGGGGCAATTACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCACAGAGGCTGATGCCCTCAAGCTGATCAAAGAGGAAAAGATAAAGGAGCATGTGCGTGAAGCCGGGAACAGCAGATGTCTTATTTTATGA 1044 0.5316 MASTNALPPTGNGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENDVRSDGINFEKGARTALAFVTLRADGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAREAGCLLSYDPNLRLPLWPSAEEARQQILSIWDKADVIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGEHGSRYYTKNFRGSVEAFHVNTVDTTGAGDSFVGALLSKIVDDQSILEDEARLREVLKFTNACGAITTTKKGAIPALPTEADALKLIKEEKIKEHVREAGNSRCLIL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00461 347 PANTHER HEXOKINASE FAMILY MEMBER 20 324 - -
Gma12g00461 347 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Gma12g00461 347 PANTHER BNAA04G18320D PROTEIN 20 324 - -
Gma12g00461 347 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Gma12g00461 347 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Gma12g00461 347 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Gma12g00461 347 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Gma12g00461 347 Gene3D - 13 338 IPR029056 -
Gma12g00461 347 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Gma12g00461 347 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Gma12g00461 347 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00461 Gma-Chr12 3777062 3781450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00461 K00847 - gmx:100812560 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00461 12 3777062 3781450 Gma12g00461 12 3777062 3781450 ECH
Gma13g03078 13 45100959 45105283 Gma12g00461 12 3777062 3781450 PCT
Gma15g00284 15 2454794 2458266 Gma12g00461 12 3777062 3781450 PCT
Gma12g00461 12 3777062 3781450 Gma13g03078 13 45100959 45105283 PCT
Gma12g00461 12 3777062 3781450 Gma15g00284 15 2454794 2458266 PCT