Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03007 ATGAAAGTGAAGGTGATGAGAGTCGCGAGCAGCAGCAGCAGCAACGGGTTGAGCGTGGTAGCCAAAATGAGAAGAAGCAGCAGCGTTTCTTTGTTCTCCGTTCGAGCCTGCCATGATCTCCCTCATGGACCTTCCTGCATCTACGTTGGCCCCCTCCACACCGCAACCCAAGAGACCCTCGAAGCTCTTTACTCTCAGCAGGCACGGGATGCATATTACAGCGGAGAGCCTTTGATTCTTGATGACATGTTTGATAGACTAGAGTTGAAGCTTAAGTGGTATGGTTCTAAGTCAGTTGTCAAGTATCCCAGATGCAGTATCAGAAGGCATTCAACATATGCTGATGCTGACGAAGATCTGTCAATGGCTATTGCATTAGCAAGCTTATGGTCCCTATTTCTCGCACTTGGCTGTTCAGCGTGTGTTTCGCCCATATTCTACACTGTTAGCACGGCTTATCACAGAGCATTCGACTCAGGATTATCATACGGTAGCCCATCTTCATCGGGACTAGGGCTTCTTTTTGTCGTCAATAGCATTATCTTCATGGCACTGGGTTTCGTCATTGGCTACCCAGTTGCTTCAGCTTCAGTTAAGGTACTTCAAGGTTTGTGGAGGAATGATTTAGCGGCACTAAAGGGTTCTTGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAACGGACAAGGCTAACAACTCTCCCCATAGAGCAGATTGTCATGTGTGTGAATGCTTATTGGAATTTCGCACCGAAGTTGAGCAATCGGCTTTAAGATTAGGGAGACAATGGGTTTATGGGCGTATTTACCTTGTTCGCAGATCCAGACGCCAAAGAGAACCAGAGATGGGTAGCCCCGAGAAGAATGAAAATAAGGGCTTTTTCGCCACCATGACTTCCGGCTTCTCCATGTTCAGCAGCGCCATGCACCGATCTGTCAACGGGATGCTGGGACATGAAGGGGTAGAAGTCATAAATCCGGAGGGTAGTAAAGAGGATGCAGAGGAGGAAACTCAAAGAGGAAGATGGAAACCAGAGCGCCATGGGCTATATCTGTGTACTTTGCATATCAACGAACCAGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGTCATCAACTATGCTTCTACATACTTAGCAGTGTGCGTAAGAGGTTAGACTATAGCTTTTATGGCTATCAGGTGCCAACCAAGCGCCGAGCTACCCGATTAGCTAAGAGGAGGGTTACATTTCAAAGAAGGTTGGAAGACAATCAGATGTGTGCATTTGACTTATTGGCCACTGTAGCTGACAATTTATTGCAAGAGAAACAGAATCCAACCACATCCAGTGATAGATCATCGGAAAAGGATGGGGATGGATTTCCTAAAGAGGAACGCCAGGATGCAAATAAACCATTCAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAAATGTCAGCTTGAATTTGTTAAAGAAGGAAGCTCAAATGCAAATAGTTTCAAAGTTGAGCTTTCGGATGAAGGAAGTAGTGACAGAAAATGTTTCTCTAATATTTCTTCACAAGTCTACAATCAAAATTGTTGTTCGAAGGAACTCCCCGAACATGAAATTGATGGCCATTTATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAGATTGTTGCTGAGACACTGGTGGATGGAAAAGGCCACAATGGGATGGAAAAATTAGCTAGCAAAGTTGAATTAGGTTCCTGTGGATATCTAGAGAGTAGGGGTTGCAAGTTAGATGGTGATGTTAGTAAAGTAAAAGACGATAAGTTTGGGAAGGTTCCCATTGATACTGGGACTGGGTTGTGCTGTTTTGAGGATACCTTGGATGAAAAACCTCTAGCACTGATCAGTTCATGTGGCAATGCCAAGATGTCCGGGTATGATGACAGCATGCCTCAGAGCTCATGGTCCAAAGGTTGTGACAATGTACTGGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCCAGTACCAAAATAAAGTCCTTTAGGCCAATTACTTGTATAGATGATAGAAAAACAAAGAAAAGATTGGCTTCTAAACATCATAAAGTTTCTCAAGAATCCAAGCATGATATACTATCTAACAGTGTTTTGGATGGAAATTTGAAGTCAGTTTACAGCAGTAGGAAGAACTATTATAAAAGCCAAAGATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAACTGCAGCTCTGATACAAATTCTAACGGATATATCAGAAGTGATGACACTTGTTATTCACCCAAGAATGACACGAACCAAAGTGTTTCTTGTTCATCTTCTGGAATGAGCCAAGATCATGGAACATCATCCTTGGGACACTCTGCATTACGATCTAGAGATTCTTACGTGAAGCTTAGGATCAAATCATTTAGAGTGCCCGAGCTTTTTATCGAGATTCCAGAAACTGCAACCGTTGGGTCCTTGAAGAGGACAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGCGGATTGCGTGTGGGTGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTTCAGACTGGAATTTCTCATGATAACCACCTGGATGCTTTGGGCTTCGCCTTGGAGCCTAATTGTTCACGAAACCGACCATCTGCATGTGCTACAACAGATTCTCTCCACATTCCTAGTGCAGATATGCCTCAGCCTTTAATAGGGTACCCTTCAAGTCCTGCTGTAATTCATCAGAGGATTCAGGGCTTTTCTAACATGTTAGCCAAGCATCAAGCAACCAGTTCAGGTAACCTTGTTGAAAGTGATCATGATTCAGCACCTTCTCCTATCAACACATCCGGTGAAAAATATTTGTCAGATTCAAAAGAACTAATTACTGTTCCTGAAATGGGTATGGAGGCACTAGCTGTGCTACCTGTGCATCAGAAGTCAAAACGAACTGAGATCGCACAGCGCCGAATTCGTAGGCCTTTTTCTGTTACTGAAGTGGAAGCACTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGCGATGTTAAACTTCGTGCATTTGACAATGCAAAGCATCGGACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCAGCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGGTCCTAACTGCTCACGCATATTGGTCCCAGCAACAGACTAAGCAACAGCTTAAGCACCACTCAACAAAACCTTGCCTTCTCCTTTATACTATGTCACACTTTATCTATCATGTTAAAATTAGAACAAGGTGA 3387 0.4352 MKVKVMRVASSSSSNGLSVVAKMRRSSSVSLFSVRACHDLPHGPSCIYVGPLHTATQETLEALYSQQARDAYYSGEPLILDDMFDRLELKLKWYGSKSVVKYPRCSIRRHSTYADADEDLSMAIALASLWSLFLALGCSACVSPIFYTVSTAYHRAFDSGLSYGSPSSSGLGLLFVVNSIIFMALGFVIGYPVASASVKVLQGLWRNDLAALKGSCPNCGEEVFAFVRTDKANNSPHRADCHVCECLLEFRTEVEQSALRLGRQWVYGRIYLVRRSRRQREPEMGSPEKNENKGFFATMTSGFSMFSSAMHRSVNGMLGHEGVEVINPEGSKEDAEEETQRGRWKPERHGLYLCTLHINEPGSLLTLSLERLMRWLTMVELHFLQNSHQLCFYILSSVRKRLDYSFYGYQVPTKRRATRLAKRRVTFQRRLEDNQMCAFDLLATVADNLLQEKQNPTTSSDRSSEKDGDGFPKEERQDANKPFKTELSDEASCDRKCQLEFVKEGSSNANSFKVELSDEGSSDRKCFSNISSQVYNQNCCSKELPEHEIDGHLCIASIVTSSSCSEKIVAETLVDGKGHNGMEKLASKVELGSCGYLESRGCKLDGDVSKVKDDKFGKVPIDTGTGLCCFEDTLDEKPLALISSCGNAKMSGYDDSMPQSSWSKGCDNVLVDSRDDDENFSGCAHPSTKIKSFRPITCIDDRKTKKRLASKHHKVSQESKHDILSNSVLDGNLKSVYSSRKNYYKSQRSQMNIPFKKRKLFNCSSDTNSNGYIRSDDTCYSPKNDTNQSVSCSSSGMSQDHGTSSLGHSALRSRDSYVKLRIKSFRVPELFIEIPETATVGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNCSRNRPSACATTDSLHIPSADMPQPLIGYPSSPAVIHQRIQGFSNMLAKHQATSSGNLVESDHDSAPSPINTSGEKYLSDSKELITVPEMGMEALAVLPVHQKSKRTEIAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISAQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKHHSTKPCLLLYTMSHFIYHVKIRTR 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03007 1128 MobiDBLite consensus disorder prediction 784 808 - -
Gma13g03007 1128 CDD SANT_TRF 1014 1064 - -
Gma13g03007 1128 Gene3D - 1001 1105 - -
Gma13g03007 1128 SUPERFAMILY Homeodomain-like 1014 1095 IPR009057 -
Gma13g03007 1128 PANTHER TELOMERIC REPEAT BINDING PROTEIN 399 1112 IPR031105 -
Gma13g03007 1128 MobiDBLite consensus disorder prediction 452 487 - -
Gma13g03007 1128 ProSiteProfiles Ubiquitin domain profile. 818 888 IPR000626 GO:0005515
Gma13g03007 1128 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 399 1112 - -
Gma13g03007 1128 SUPERFAMILY Ubiquitin-like 813 902 IPR029071 -
Gma13g03007 1128 SMART sant 1012 1065 IPR001005 -
Gma13g03007 1128 MobiDBLite consensus disorder prediction 459 487 - -
Gma13g03007 1128 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1008 1067 IPR017930 -
Gma13g03007 1128 ProSiteProfiles Myb-like domain profile. 1008 1063 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03007 Gma-Chr13 44551485 44567470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03007 - - gsj:114374220 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03007 13 44551485 44567470 Gma13g03007 13 44551485 44567470 ECH
Gma13g03007 13 44551485 44567470 Gma15g00357 15 3031318 3033121 GST
Gma13g03007 13 44551485 44567470 Gma12g00556 12 4645600 4648652 PCT
Gma13g03007 13 44551485 44567470 Gma11g01258 11 10714018 10716688 PCT
Gma12g00556 12 4645600 4648652 Gma13g03007 13 44551485 44567470 PCT
Gma11g01258 11 10714018 10716688 Gma13g03007 13 44551485 44567470 PCT