Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00556 ATGGCCGGCACGAGCCTCTCTCACGTGATCCAATCGACGGTCCTAGAATTGCCCAGAACCACCCGCCACGTCAGAATCTCCGCCAAGAGCCACCGCGTCTCCGCCACCTCTGACCAACGCCCCGCGGGACCCTACTGCATCTACGTTGGCCCCCTCGAAACCGCCAACAAAGAGAACCTCGAAGCCCTTTATTGCCAAGCACGGGATGCTTATTATAGTGGTCAACCTCTGATAGTTGATGACATGTTTGATAGAGTAGAGTTAAGGCTAAGATGGTTTGGTTCAAAGTCAGTTGTAAAGTATCCTCGGTGCAGTATTAGGAGGCAATCCACATTTGCTGATGCTGAGGAAGATCTGTCTATGGTTTTTGCATTAGCAAGCACATGGGCCATGTTCCTTGCATTTGGCAGTTTAGCCTGTGTTGGTCCCGTATCATACACTGTTGGCATGGCTTATCAAAATGCATTCGATTCAGGCTTATCACTTGGTAGCCAAACACCTGGACTAGGGTTTCTGGCCGTGGTGAACAGCCTTATTTTCGTTGGGCTGGGTTTTGTGATCGGCTACCCTGTTGCTTCAGCTTCAGCTAAGGTGCTTCAAGGCCTTTGGAGGAATGACTTGGTGGCACTAAAAGGTGCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAATATTGAGTCACCTCACAGAGCAGATTGTCATGTGTGTGAATGCATATTAGAATTTCGCACAAAAGTTGAGCAATCAGTCTCAAGATTTGGTAGACAGTGGGTTTATGGGCGTATTTATCTTGTTTCATTAAGAGGCAGATCCCGACGTAAATAA 843 0.4769 MAGTSLSHVIQSTVLELPRTTRHVRISAKSHRVSATSDQRPAGPYCIYVGPLETANKENLEALYCQARDAYYSGQPLIVDDMFDRVELRLRWFGSKSVVKYPRCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPVSYTVGMAYQNAFDSGLSLGSQTPGLGFLAVVNSLIFVGLGFVIGYPVASASAKVLQGLWRNDLVALKGACPNCGEEVFAFVRMDRNIESPHRADCHVCECILEFRTKVEQSVSRFGRQWVYGRIYLVSLRGRSRRK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00556 280 PANTHER PGR5-LIKE A PROTEIN 8 277 - -
Gma12g00556 280 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 8 277 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00556 Gma-Chr12 4645600 4648652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00556 - - gmx:100810752 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00556 12 4645600 4648652 Gma12g00556 12 4645600 4648652 ECH
Gma12g00556 12 4645600 4648652 Gma11g01258 11 10714018 10716688 GST
Gma13g03007 13 44551485 44567470 Gma12g00556 12 4645600 4648652 PCT
Gma15g00357 15 3031318 3033121 Gma12g00556 12 4645600 4648652 PCT
Gma12g00556 12 4645600 4648652 Gma13g03007 13 44551485 44567470 PCT
Gma12g00556 12 4645600 4648652 Gma15g00357 15 3031318 3033121 PCT