LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g02997	ATGTCACTCATGTTGAACAAGAACAACAGCAGCAAAATGAGCATACCTTTGTTCCATGAGTTTAAAAAGCAAGCTTCTTTCTTCCTCAAGGAAAAATTCAAGACCGCTAGGTTGGCTCTCACCGATGTTACCCCCACAGAGCTAATGACAGAAGAAGCTACAAAAGGAAATTCATGGGCCCCAGATCCCCCAACACTTAGATCAATTTCAAGGGCTGCTTTTGAGCTAGATGATTATTTGAGAATAGTAGAGATTCTGCACAAAAGACTCCTTAAATTTGACAACAAGAATTGGAGGGCCTCTTACAATTCTCTGATTGTGCTGGAGTACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAAAGTGACAAAGATGTAATTGGTGAAATGAAATGCTTTCAGCATATTGATGACAGTGGGTTCAATTGGGGTCTAGCTGTTGGAAAGAAATCAGAACAGATATTGAAACTGCTGGAAGAAGGAACTCTCCTTAAGAAAGAAAGAAACCATGCTCGGAGGTTGTCCAGAGGAATTCAAGGTTTTGGAAGTTTCGGTCAACATTCAACTCAAGCACAAGGTGTTCTGCAGGAAAAATCATTGCCAACCACATTTGACAGACGTAACTCAGACTTCAATAACCATGAAAATCAGGAAAACCAATCCTTTGGCTCAAACCATTGTCTGGACACAGCAGCAGTTAAATCTGCTAGTCCAAGCTCTCAAGGTGGAATTTTCAAGTCCTTGGATGATAGTGCAGAAACTGAGAGCCACCTCGATGATCAGGGAAACATTCAAATGCACCAGAAATCTGAAACAAGCTCTGAAGAAAACATGACACCTAGCAAGGAGGAATTCTATCTATGGAACTTGAAAGGGGAGTCTAATCCACTTTTGGATGGTAGCCAAGAGAATGATTCTAGACTTGGGATGTTCATAGCCGAAGATGATCACCCCTTTGACTCTACAGAAATGCCTGCCACTTCTTCCCTACTTTCTTCTACGTGA	1014	0.4172	MSLMLNKNNSSKMSIPLFHEFKKQASFFLKEKFKTARLALTDVTPTELMTEEATKGNSWAPDPPTLRSISRAAFELDDYLRIVEILHKRLLKFDNKNWRASYNSLIVLEYLLTHGPESVAEEFQSDKDVIGEMKCFQHIDDSGFNWGLAVGKKSEQILKLLEEGTLLKKERNHARRLSRGIQGFGSFGQHSTQAQGVLQEKSLPTTFDRRNSDFNNHENQENQSFGSNHCLDTAAVKSASPSSQGGIFKSLDDSAETESHLDDQGNIQMHQKSETSSEENMTPSKEEFYLWNLKGESNPLLDGSQENDSRLGMFIAEDDHPFDSTEMPATSSLLSST	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g02997	337	PANTHER	EPSIN/ENT-RELATED	16	336	-	-
	Gma13g02997	337	PANTHER	EPSIN-2-LIKE	16	336	-	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	182	201	-	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	236	337	-	-
	Gma13g02997	337	CDD	ENTH	46	162	-	-
	Gma13g02997	337	Pfam	ENTH domain	44	165	IPR013809	-
	Gma13g02997	337	ProSiteProfiles	ENTH domain profile.	38	171	IPR013809	-
	Gma13g02997	337	SMART	enth_2	44	171	IPR013809	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	207	226	-	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	184	201	-	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	236	250	-	-
	Gma13g02997	337	Gene3D	-	40	187	IPR008942	-
	Gma13g02997	337	SUPERFAMILY	ENTH/VHS domain	24	171	IPR008942	-
	Gma13g02997	337	MobiDBLite	consensus disorder prediction	253	267	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g02997	Gma-Chr13	44467593	44469538	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g02997	K12471		-	gmx:100787788	645.195

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma13g02997	13	44467593	44469538	Gma13g02997	13	44467593	44469538	ECH
	Gma13g02997	13	44467593	44469538	Gma15g00368	15	3108093	3110156	GST
	Gma13g02997	13	44467593	44469538	Gma12g00563	12	4716747	4718121	PCT
	Gma13g02997	13	44467593	44469538	Gma11g01264	11	10780923	10783102	PCT
	Gma12g00563	12	4716747	4718121	Gma13g02997	13	44467593	44469538	PCT
	Gma11g01264	11	10780923	10783102	Gma13g02997	13	44467593	44469538	PCT