Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g00563 ATGAGCACACCCTTGTTCCATGAATTCAAAAGGCAAGCTTCTTTCTTCTTCAAGGAGAAAATCAAGACTGCTAGATTAGCACTAACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACAAGTGGAAATCCATGGGCCCCAGATGCCAGAACTCTCAGATCAATTTCAAGGGATGCTTTTGAGCTAGATGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGTTTCTTAAATTTGAAAAGAAGAATTGGAGGGTCTCTTACAATTCCCTGATCGTGCTTGAGCACCTGTTGACTCATGGACCAGAGAGTGTTGCTGAGGAATTTAAGAGTGACAAAGATGTCATTAGCCAGATGAAAGGTTTTCAGTATATTGATGACACTGGGTTTAATTGGGGCCTAACTGTGAGAAAGAAATCTGAGAGGATAACGAAACTGCTGGAAGAAGGGACTCTTCTCAAGGAAGAGAGAAAAAATGCTAGAAGGTTATCTAGAGGGATTGAAGGTTTTGGAAGTTTTTCTCATTTGTCAACTCAGGGACAAGGCGTTCTACGTGAGAGATCGTTGCCATCCACGCTTAGGAGATATGATTCAGACTTGAACAACCGTGAAGATCTGGAAAACCAGTCCTCTTGTTTAAACAATGGTGTGGATGTGGACACAGTAGCTGTTAAATTTCCAAGCCATCAAGGTGGAACCTTCAAGTCATTGGGTAGTGTGGAAGCCAAGGGATATCAGGATGATGATCTTGGCAACAACAATCAAATGCTTCAGAAATCTGAAACAAGTTCTAAAGAAAACATGGAGCCTAGCAAGGAGGAGTTCCATCTATGGAACTTGAATGGGGAGTCCAAACCAATTTTGGATTGGGGTGAAGAGGACTCCAAGCTTGGAATCATCAGAACAGAAGATGATCACCCCTTTAGTTCAACAGAAATGCATGTCACTGCCTCCTTGCTTTCTGCTTGCTAG 978 0.4254 MSTPLFHEFKRQASFFFKEKIKTARLALTDVTPAELMTEEATSGNPWAPDARTLRSISRDAFELDDYWRIVEILHKRFLKFEKKNWRVSYNSLIVLEHLLTHGPESVAEEFKSDKDVISQMKGFQYIDDTGFNWGLTVRKKSERITKLLEEGTLLKEERKNARRLSRGIEGFGSFSHLSTQGQGVLRERSLPSTLRRYDSDLNNREDLENQSSCLNNGVDVDTVAVKFPSHQGGTFKSLGSVEAKGYQDDDLGNNNQMLQKSETSSKENMEPSKEEFHLWNLNGESKPILDWGEEDSKLGIIRTEDDHPFSSTEMHVTASLLSAC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g00563 325 SMART enth_2 32 159 IPR013809 -
Gma12g00563 325 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
Gma12g00563 325 Pfam ENTH domain 32 153 IPR013809 -
Gma12g00563 325 MobiDBLite consensus disorder prediction 247 274 - -
Gma12g00563 325 Gene3D - 28 175 IPR008942 -
Gma12g00563 325 MobiDBLite consensus disorder prediction 250 266 - -
Gma12g00563 325 CDD ENTH 34 150 - -
Gma12g00563 325 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Gma12g00563 325 PANTHER EPSIN-2-LIKE 4 324 - -
Gma12g00563 325 PANTHER EPSIN/ENT-RELATED 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g00563 Gma-Chr12 4716747 4718121 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g00563 K12471 - gmx:100816643 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00563 12 4716747 4718121 Gma12g00563 12 4716747 4718121 ECH
Gma12g00563 12 4716747 4718121 Gma11g01264 11 10780923 10783102 GST
Gma13g02997 13 44467593 44469538 Gma12g00563 12 4716747 4718121 PCT
Gma15g00368 15 3108093 3110156 Gma12g00563 12 4716747 4718121 PCT
Gma12g00563 12 4716747 4718121 Gma13g02997 13 44467593 44469538 PCT
Gma12g00563 12 4716747 4718121 Gma15g00368 15 3108093 3110156 PCT