Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02906 ATGCGAATCCTCGTCCTGCTCTCTCTCGCCACCCTTCTCCTCTTCTCCTCCTTCTCTCCCACCTTCTGCGACCACCTCGCCGACGACGAGGACCTCAGCTTCCTCGACGAGCCCTCCGCCGCGCCGGAGCACGACCACCACTACGGCGCCGATGACTCCAATTTCGGCGACTTTGAGGACTTCGAGGAGGACGACGCGGAGGCGTACAAGCAGCCCGAGGTGGACGAGAAGGACGTCGTCGTTTTGAAGGAGAAGAACTTCACCGACGCCGTCAAGAACAACCGCTTCGTCATGGTCGAGTTCTACGCGCCCTGGTGCGGCCACTGCCAGGCCCTCGCGCCGGAGTACGCCGCCGCCGCGACGGAACTCAAGGGCGAAGACGTAATTTTGGCAAAGGTGGATGCCACCGAGGAGAATGAATTGGCGCAGCAGTACGATGTTCAGGGTTTCCCCACTGTCCACTTCTTCGTTGATGGCATTCACAAGCCTTATAATGGCCAAAGGACCAAAGATGCTATAGTGACGTGGATTAGGAAGAAGATCGGACCTGGCATATACAACTTGACTACAGTGGAGGAGGCTCAACGCATTTTGACCAACGAAACTAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTTGGTCCTGAGAGTGAGGAGCTTGCTGCTGCTTCAAGGCTTGAGGATGATGTCAATTTTTATCAAACTGTGAATCCTGATGTGGCAAAGCTTTTCCATATTGACCAAGATGTTAAGCGTCCAGCATTGATCCTCATTAAGAAAGAGGAGGAAAAACTTAACCACTTTGATGGAAAATTCGAGAAGTCAGCAATAGCGGACTTTGTCTTCTCCAACAAGCTTCCTTTGGTAACAATTTTTACAAGAGAAAGTGCCCCATCAGTCTTTGAAAATCCAATCAAGAAACAGTTGTTGCTGTTTGCAACTTCAAATGATTCAGAGACTTTGGTCCCAGCATTTAAAGAAGCAGCAAAGTCTTTCAAGGGAAAGTTGATCTTTGTATATGTGGAAATGGATAACGAAGATGTTGGAAAGCCTGTTTCAGAATACTTTGGTATCAGTGGGAATGCTCCAAAAGTACTTGGATACACTGGGAATGATGATGGAAAAAAATTTGTGCTTGATGGAGAGGTGACTACTGACAAAATTAAGGCATTTGGGGAAGATTTCGTTGAAGACAAGCTAAAACCTTTTTACAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAGTAGTTGGTAATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTCGAGATTTATGCTCCCTGGTGTGGCCATTGCCAATCACTGGAGCCAATATACAACAAGCTTGCAAAACATCTTCGCAATATTGATTCTCTTGTAATAGCCAAGATGGATGGAACAACAAATGAGCATCCCAGGGCTAAGCCTGATGGATTCCCCACTCTTCTCTTCTTCCCGGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCCTTCTACAAGTTCCTCAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAACTTCTGAATCCGATTCCAAGGGGAGCTCTGATGCCAAAGAGAGCCAGAGTAGTGATGTGAAGGACGAATTATGA 1677 0.4681 MRILVLLSLATLLLFSSFSPTFCDHLADDEDLSFLDEPSAAPEHDHHYGADDSNFGDFEDFEEDDAEAYKQPEVDEKDVVVLKEKNFTDAVKNNRFVMVEFYAPWCGHCQALAPEYAAAATELKGEDVILAKVDATEENELAQQYDVQGFPTVHFFVDGIHKPYNGQRTKDAIVTWIRKKIGPGIYNLTTVEEAQRILTNETKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDQDVKRPALILIKKEEEKLNHFDGKFEKSAIADFVFSNKLPLVTIFTRESAPSVFENPIKKQLLLFATSNDSETLVPAFKEAAKSFKGKLIFVYVEMDNEDVGKPVSEYFGISGNAPKVLGYTGNDDGKKFVLDGEVTTDKIKAFGEDFVEDKLKPFYKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQSLEPIYNKLAKHLRNIDSLVIAKMDGTTNEHPRAKPDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASIPFKLQKPTSTSESDSKGSSDAKESQSSDVKDEL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02906 558 MobiDBLite consensus disorder prediction 530 558 - -
Gma13g02906 558 TIGRFAM pdi_dom: protein disulfide-isomerase domain 82 180 IPR005788 GO:0003756
Gma13g02906 558 SUPERFAMILY Thioredoxin-like 72 182 IPR036249 -
Gma13g02906 558 ProSiteProfiles Thioredoxin domain profile. 60 182 IPR013766 -
Gma13g02906 558 CDD PDI_a_PDI_a'_C 417 519 - -
Gma13g02906 558 CDD PDI_a_family 80 177 - -
Gma13g02906 558 ProSitePatterns Thioredoxin family active site. 437 455 IPR017937 -
Gma13g02906 558 SUPERFAMILY Thioredoxin-like 186 296 IPR036249 -
Gma13g02906 558 ProSiteProfiles Thioredoxin domain profile. 394 524 IPR013766 -
Gma13g02906 558 SUPERFAMILY Thioredoxin-like 284 414 IPR036249 -
Gma13g02906 558 Gene3D Glutaredoxin 67 181 - -
Gma13g02906 558 ProSitePatterns Thioredoxin family active site. 98 116 IPR017937 -
Gma13g02906 558 Gene3D Glutaredoxin 282 411 - -
Gma13g02906 558 PANTHER PROTEIN DISULFIDE ISOMERASE 2 548 - -
Gma13g02906 558 PRINTS Thioredoxin family signature 97 105 - -
Gma13g02906 558 PRINTS Thioredoxin family signature 105 114 - -
Gma13g02906 558 PRINTS Thioredoxin family signature 146 157 - -
Gma13g02906 558 Pfam Thioredoxin 79 179 IPR013766 -
Gma13g02906 558 Pfam Thioredoxin 417 502 IPR013766 -
Gma13g02906 558 CDD PDI_b'_family 306 396 - -
Gma13g02906 558 CDD PDI_b_family 185 284 - -
Gma13g02906 558 Gene3D Glutaredoxin 182 281 - -
Gma13g02906 558 TIGRFAM ER_PDI_fam: protein disulfide isomerase 77 558 IPR005792 GO:0003756
Gma13g02906 558 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 548 - -
Gma13g02906 558 Gene3D Glutaredoxin 412 525 - -
Gma13g02906 558 MobiDBLite consensus disorder prediction 541 558 - -
Gma13g02906 558 SUPERFAMILY Thioredoxin-like 413 524 IPR036249 -
Gma13g02906 558 Pfam Thioredoxin-like domain 220 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02906 Gma-Chr13 43647526 43651836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02906 K09580 - gmx:100804924 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02906 13 43647526 43651836 Gma13g02906 13 43647526 43651836 ECH
Gma13g02906 13 43647526 43651836 Gma12g00600 12 5029051 5032622 PCT
Gma13g02906 13 43647526 43651836 Gma11g01645 11 17804686 17809313 PCT
Gma12g00600 12 5029051 5032622 Gma13g02906 13 43647526 43651836 PCT
Gma11g01645 11 17804686 17809313 Gma13g02906 13 43647526 43651836 PCT