Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma12g00600 | ATGCTAAGTCGTAAACGACTCATCGTTTCGCTCTCTCTCGCCACTCTCCTTCTCTTCTCCTCCCTTTCCCTCACTCTCTGCGATAAAATCCCCCCTCAAAACGACAACAACAACGATGACGACGAAGATCTCAGCTTCCTCGAGGAACCCGATGACGCCGCCGCCACTTCGCACCACGGCCATTTTCCAGATCCCGACCGGTTCGACGAGGACGGCGACGACGACGGCGACTTCGGCGACTTCTCAGGCTTCGACCACTCGACGGAGGAGGCGTTCGAGGTGGATGACAAGGACGTCGTCGTTTTGAAGGAGCGCAACTTCACTACCGTCGTCGAGAACAACCGCTTCATCATGGTCGAGTTCTACGCCCCCTGGTGCGGCCACTGCCAGGCCCTCGCGCCGGAGTACGCCGCCGCCGCCACCGAGCTCAAGCCCGACGGCGTCGTTCTCGCCAAAGTCGACGCCACCGTCGAAAACGAACTGGCGAACGAGTACGACGTTCAGGGTTTCCCCACCGTCTTCTTCTTCGTCGATGGGGTCCACAAGCCCTACACTGGCCAGAGAACCAAAGACGCTATAGTGACATGGATTAAGAAGAAGATAGGGCCTGGTGTGTCCAACATAACTACGGTGGATGATGCTGAACGCATATTGACAGCTGAAAGCAAAGTTGTTTTGGGCCTCCTTAACTCTTTAGTTGGTACGGAGAGTGACGAACTAGCTGCAGCATCAAAGCTTGAGGATGATGTCAATTTTTATCAAACTGTGGTAGCTGATGTGGCGAAGCTTTTCCATATTGATCCGAGTGTTAAACGCCCTGCTTTGATCTTGCTCAAGAAAGAGGAAGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAAGCTGAAATAGCCGATTTTGTAACCTCCAACAAGCTTCCTTTGGTTACAATTTTTACAAGAGAAAGTGCCCCGGTAATCTTTGAAAGTCAAATCAAGAAACAGTTGTTGCTGTTTGTGACTTCAAATGATACAGAGAAGTTTGTTCCAGTATTTAAAGAAGCAGCAAAAAAATTCAAGGGGAAGCTGATCTTTGTTCATGTGGAATTGGATAATGAAGATGTAGGAAAGCCTGTTGCAGATTATTTTGGTATCACTGGGAATGGTCCCAAAGTACTTGCATATACAGGAAACGATGATGGAAGAAAATTTTTGCTTGATGAGGAGCTGACTGTTGACACAATTACGGCATTTGGGAATGATTTCCTTGAAGAAAAGCTAAAACCTTTCCTCAAGTCTGATCCAGTTCCTGAAAGTAATGACGGTGATGTGAAAATAGTTGTTGGGAATAACTTTGATGAAATTGTTTTGGATGAGTCAAAGGATGTTTTGCTTGAGATTTATGCACCCTGGTGCGGTCACTGCCAAGCCCTGGAACCAACATACAACAAGCTTGCTAAACATCTTCGCAACATTGAGTCTATTGTTATAGCCAAGATGGACGGAACAACAAATGAGCATCCCAGGGCCAAGTCTGATGGATTCCCCACCCTTCTCTTCTTCCCAGCAGGCAACAAGAGTTCTGACCCTATTCCTGTTGATGTGGATCATACAGTGAAAGCCTTTTATAAGTTCCTCAGGAAACATGCATCAATCCCATTCCAGCTCCAGAAACCAACCTCAACTGCTAAAACCGGGAGTGAGAGTTCCTATGTCAAGGAGAGCCAAAGCAGCAGCACGGATGTGAAGGATGAATTATGA | 1740 | 0.4747 | MLSRKRLIVSLSLATLLLFSSLSLTLCDKIPPQNDNNNDDDEDLSFLEEPDDAAATSHHGHFPDPDRFDEDGDDDGDFGDFSGFDHSTEEAFEVDDKDVVVLKERNFTTVVENNRFIMVEFYAPWCGHCQALAPEYAAAATELKPDGVVLAKVDATVENELANEYDVQGFPTVFFFVDGVHKPYTGQRTKDAIVTWIKKKIGPGVSNITTVDDAERILTAESKVVLGLLNSLVGTESDELAAASKLEDDVNFYQTVVADVAKLFHIDPSVKRPALILLKKEEEKLNHFDGQFVKAEIADFVTSNKLPLVTIFTRESAPVIFESQIKKQLLLFVTSNDTEKFVPVFKEAAKKFKGKLIFVHVELDNEDVGKPVADYFGITGNGPKVLAYTGNDDGRKFLLDEELTVDTITAFGNDFLEEKLKPFLKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRNIESIVIAKMDGTTNEHPRAKSDGFPTLLFFPAGNKSSDPIPVDVDHTVKAFYKFLRKHASIPFQLQKPTSTAKTGSESSYVKESQSSSTDVKDEL | 579 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma12g00600 | 579 | CDD | PDI_b_family | 205 | 304 | - | - | |
| Gma12g00600 | 579 | PRINTS | Thioredoxin family signature | 117 | 125 | - | - | |
| Gma12g00600 | 579 | PRINTS | Thioredoxin family signature | 125 | 134 | - | - | |
| Gma12g00600 | 579 | PRINTS | Thioredoxin family signature | 166 | 177 | - | - | |
| Gma12g00600 | 579 | SUPERFAMILY | Thioredoxin-like | 91 | 202 | IPR036249 | - | |
| Gma12g00600 | 579 | Gene3D | Glutaredoxin | 89 | 201 | - | - | |
| Gma12g00600 | 579 | ProSitePatterns | Thioredoxin family active site. | 457 | 475 | IPR017937 | - | |
| Gma12g00600 | 579 | ProSiteProfiles | Thioredoxin domain profile. | 83 | 202 | IPR013766 | - | |
| Gma12g00600 | 579 | MobiDBLite | consensus disorder prediction | 550 | 570 | - | - | |
| Gma12g00600 | 579 | PANTHER | PROTEIN DISULFIDE-ISOMERASE | 2 | 571 | - | - | |
| Gma12g00600 | 579 | Gene3D | Glutaredoxin | 431 | 545 | - | - | |
| Gma12g00600 | 579 | TIGRFAM | ER_PDI_fam: protein disulfide isomerase | 97 | 579 | IPR005792 | GO:0003756 | |
| Gma12g00600 | 579 | Pfam | Thioredoxin | 437 | 521 | IPR013766 | - | |
| Gma12g00600 | 579 | Pfam | Thioredoxin | 99 | 199 | IPR013766 | - | |
| Gma12g00600 | 579 | MobiDBLite | consensus disorder prediction | 550 | 579 | - | - | |
| Gma12g00600 | 579 | CDD | PDI_b'_family | 316 | 416 | - | - | |
| Gma12g00600 | 579 | ProSitePatterns | Thioredoxin family active site. | 118 | 136 | IPR017937 | - | |
| Gma12g00600 | 579 | ProSiteProfiles | Thioredoxin domain profile. | 423 | 544 | IPR013766 | - | |
| Gma12g00600 | 579 | PANTHER | PROTEIN DISULFIDE ISOMERASE | 2 | 571 | - | - | |
| Gma12g00600 | 579 | CDD | PDI_a_PDI_a'_C | 437 | 539 | - | - | |
| Gma12g00600 | 579 | TIGRFAM | pdi_dom: protein disulfide-isomerase domain | 103 | 200 | IPR005788 | GO:0003756 | |
| Gma12g00600 | 579 | CDD | PDI_a_family | 100 | 197 | - | - | |
| Gma12g00600 | 579 | SUPERFAMILY | Thioredoxin-like | 433 | 543 | IPR036249 | - | |
| Gma12g00600 | 579 | Pfam | Thioredoxin-like domain | 241 | 413 | - | - | |
| Gma12g00600 | 579 | MobiDBLite | consensus disorder prediction | 54 | 74 | - | - | |
| Gma12g00600 | 579 | Gene3D | Glutaredoxin | 202 | 305 | - | - | |
| Gma12g00600 | 579 | SUPERFAMILY | Thioredoxin-like | 207 | 316 | IPR036249 | - | |
| Gma12g00600 | 579 | Gene3D | Glutaredoxin | 306 | 430 | - | - | |
| Gma12g00600 | 579 | SUPERFAMILY | Thioredoxin-like | 304 | 434 | IPR036249 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma12g00600 | Gma-Chr12 | 5029051 | 5032622 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma12g00600 | K09580 | - | gmx:100785630 | 1051.97 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma12g00600 | 12 | 5029051 | 5032622 | Gma12g00600 | 12 | 5029051 | 5032622 | ECH | |
| Gma11g01645 | 11 | 17804686 | 17809313 | Gma12g00600 | 12 | 5029051 | 5032622 | ECH | |
| Gma12g00600 | 12 | 5029051 | 5032622 | Gma11g01645 | 11 | 17804686 | 17809313 | GST | |
| Gma13g02906 | 13 | 43647526 | 43651836 | Gma12g00600 | 12 | 5029051 | 5032622 | PCT | |
| Gma12g00600 | 12 | 5029051 | 5032622 | Gma13g02906 | 13 | 43647526 | 43651836 | PCT |