Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma13g02887 | ATGGTAAATGGTACTCGTTCTAGTCACAATGCTAAGGACGAGGAAAATAATAACAGGAGGGTGACACAGGATAGTGAGAAGGGAAAAATCAAATCACATCCTAATGTATCAGATACAACTGGTGTGAGAAGGTCTCCTAGAGAGACATCATCAAAGAAGAACATTCCTAACCCTTCTTCAAGTACCCGTAAGTCTGGGCGACTTGAAAATAGAGCACCACCAGCTCCTGTCGACAAAAGGAAATCTGGAAGGATTGAAAAAAAGATGCCAAGTCCTTTGAGAAGATCTGGAAGAACTAGGAGTCAGTCTTCTGCAGGTTATTCTGATTCTAAAAGCTCAGGGTCAGTGAGTTCAGACCCTAAGCCAAAAAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCTAAGGAAGTAAATGGAACTGAGGAACATCATCTGGGAACACCCCAGATCAGAGTAAAGAGAATGACTGCTCGTATGTATCGGTCTCTCTTTCAATTACCAAAGGAAGAGCCTAATAGGACCGATAAGTTAAATCAAGGTGGCAACAATGGTGAAGGCCAGATTGATGAGTGCTCTAAAGAGAGTCATGATTGTGAAGAAATCTCCAAGAATGGTGTgctatcatctgaagatggcaaatcaaaagagatgagagttgacattgggtcgagtgggtctgtgaaagatctggtagaaattaccatggctcaaggttcattggcaccatctaatgttgcgctaccatctgaagatggaaaatcgaaagagatgagagttgacactgggttgagtgggcctgtgaaagatctggtagaaaataccatgactctagattcattggcaccatctaatgCTGCAACTTATGAGACTGGTCTGGCATCTGAAAGCTTTCACCCTGATTACTGCAGAGAGGAAACATTACAGTTGTTAGTGTCAAGCAATTCCATATTGGATGAAGATTCTATCAGGAACGGTGTTGGGGATCGTAGAGGTGAAAACTTGATACCTTCTAAGAGCAAGGAAATCACTGTGGATATGGATTCAGATGTTTCTTCCATGTTGGCGAAGGGTGACAATTGCAACTTGACTCCTGATGCTAGTAGCCTGTCAAGGCTAGGTGGCAATCTTATGGGGACTGACCGTCCATCTAATGCCACACTTTATGAGACTGGTTTGCTACCTGAAAGGGTTCAGCCTGATTGTTGCAGAGAAGAAACATTACCGTCAAGCTATTCCGAGAATGGTGTGCTACCATCTGAAGATGGCAAATCAAAAGAGGCGAGAGTTGACTCTGGGTTGAGTGTGCCTGTGAAAGATCTAGTAGACAATACCGTCACTCTAGGTTCATTGGCACCATCTACTGCCGCAACTTATGAGATTGGTTTGGCACCTGAAAGCATTCAGGCTGATTACCTCAGAGAGAAAGGGAATTCCATATTGGATGAAGAAGACTTAATTAGGATTAGTGTTGGGCATGATAGTAGTGGTGAAACATTGTTACCTTCTAAGAGAAAGGGAATCATGGTGGGCATGGATTCAGATGTTTCTGCCATGTTGGCTAAGGGCGATTACTGCaacttggttcctgatagtggtagcccttcacaactaggtgttaacttggttcctgatagtggtagcccttcacaactaggtgGCAATATTATGGGGACCAACGGGTCATGTTCCAAGCAAATAAGGTTGGATTATAATCCTACAGTCAGGGAGTCTTGTATCCCTTCTGCAACTGAGCTTCAAGATGGACATTATATTGATGCAAGCATGCTGCAGAAGGATTCTCAAATTGATAATGAAAAAGAATCTGGTTTAATAACTAATTCCAATAGCAGTGCTACTCAACTAAAGGAGAGATTGTCAAGTCATATTGGATACAGATGCAAGTCTGACTCCTTTAGTTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAATTCTTCGCTCCTCATCAAAGGTTGATAGTGTTGAGGCAGTTCGTGATGTTCTTATTTCTACCCGAAAGTGTTGTAGTCATCCCTATCTTGTTGGTCCGGAACTGCAACCTTCTCTAAACAAGGGTCTCGAACCAATTGAGTATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCGATGCTTGAGGAGTTGAGGAAGAATGATTTAAGGGTGCTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGGGTTATAGGAAATTATTTGGAAGACCTATTGCGACCAAAATTTGGTTCAGATTCGTATGAACGGATTGATAAAAGTCTTCCGCCTTCCAAGAAGCATGCCGCCATGAAGAAATTTAATGATAAGAACAACAGACGATTTGTGTTTTTGTTGGAAACATGTGCTTGCCTTCCAAGCATCAAGTTGTCGTCAGTTGATTCTATAATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAGATACCTTCAGAAACTAACTCTTGATTCACAGTTTGAATTGATAAAAATATTCCGTTTATATTCATCTTTCACTGTTGAAGAAAAAGCCTTAATCCTTTCTAAGCAATGTAAGATATTTGACATCAATTCACCAAACTGGACTATCTTTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGACGAATTGAAAGTTTTTCATGATGGTGAAACTTCTTCATCAAATGTGAAATCCTTGTTTGGGCAACCACTTTTGAAAGAAGCAATGCATGAGTTCTCATCCCTACTATCTCAGGATGGAGAACATATTGATTCAAGCAACTGTTCAACTTTATTGAAAGTACAGCAAAATGGGGCAACATACCATGCAAATTCTTCTTTGCTTGGTGAGCTAAAATTTAGGGTACTTGGTGAAGAGCCAACCCAAATTTTTTGGACAAAGCTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGAAGCCGGAAGAAAGTTTATCATTTTGATGGTTCAGTCAATGGGCCTGATCTTGTAAATGTAGGAGCATCAAAGAAGCGCAGGAAAATTAGCAACAATATTGTTGAACAGCCTTCTTCAAAATCTGAAGATGAAAAGTTATCCAATGGAATCAAGGCAGGTTATTATGGTCCTTACTTATTCTGTTTGCTTGATCAAATGATAGATAGATCTCAAGGAAATAATGCTGAATCTGAGCCAAAAAGTAGACAGCATGATGAGCAGAGGAGCTTACTTCTTTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTCTTCCAGATAACGTCAAGAGAATGATTGATAATTTTCTTGAATATGTTATGAACAATCACGATGTCAATAGGGAACCGTTTTCAATATCACAGGCTTTTCAATTATCTCTGTGTTGGACTGCAGCTTCTTTGCTGAAACACAAACTTGACCCCATTGCTTCTCTTATACAAGATTTGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTGTTCTATGTTGTGTTGTTTGAAGAAAATATTTTTATATCGTACAGGAAATTATCATGATACCGGTTCTCCAAAAGCATCTGGACCATCAAACAGGGCATATTCCTGTACAGGAGTTGCACGAGAGGTTGAATTGTTCAAAAAAGATATGTCCAAAAGTATTAAAGAAATTCAGAAGAAGTGTGAAAAGAAGCTGAAGAAGCTACATATTTTGCAAGAAGAAGAGAAGCAAAGGTTGAGAGCAGCTATTGAGGAAGAAAAGGCTAAATTTGAGGAAAGGTACAAAATAGAGTCTGCTGTTATTCGATCCTGCTCTCCCAATGATGTTACAAGAATGGAAAAGCTCAGAGTTTTGAATACTGAATATGAAAAAGGAATTGAAGAACTAAAATTTCACCATGATTCATGTCTCAAGGATCTTGAGGACAAGCAATTAGCTGAAATACAGAAGTTTCAAGATAAGGAGGCCGCTTGGGTAGAAGATGTGAAATCTTGGGCCGACAATGAATATCTAAGCATAATTGCTTCAAAGGAACTTGGAACTGGGGTTGAATCCTTGCAGACTTGTGATCAAGTACTGCCTGACAGTGGTCTAAAAAATCATTTGGCTGGTACTGCTGCGAATCCTCCTTCATCCATGGAACAAAAATCTGATGGAGGTGCTGTAAATGAACTTTCAGATAGAGAATTAAGACTGAGTAATGGTCCAGATAACAATACCCTTTTGAGTCCACAGAACCAAAATTCTGGGGGCCCATTAGATGTCCAAGGTTTAGATAGAGTTTTATCACCAAGGGCTTGTCAAGCTGCTAGTTCAAGTGATGGTCCGAATACAATTTCCATTCCAAATCCACTTTTGGAGCAACAAACTACCAACGGAGTCCCTTTGAGTATTCCAGCAGCAGTTGATTGTCATGATGATATAGAGCATTTAACAAATGCTGTGTTGGGGGATAAAAGAACCACATCAAACCAGCAGGAAGGAGCACCTAAAACCATGACAGAATTGTCCCAGGGGACTCCAGTATCTAGAACAGTTAATGTCATGGATCCTCCAGAACAAGTGCAGCATTTATCTGTGGAGTCCTCTCCTCACCATGATATATCTGGGGAAATGTTGCATTCTTCCAGACAACCTGAACTGTTATCTAGTGCAGTTGATGTTGCACCCGCTGATCAATCCAATCATGTTTCACTGATCGTGAAGCCTGTGGAGCAGGTGCAACAAGTATCATCTGCAGAGCTCCCTTCTTCCCATCTGGATTCAACTAATTTACCTTTCACAACCGAACTTGAACATCAGCCAACTGTGGTTCCAAATCAAGACGTGCAACCTGATTCAAATTTGGAAGTTGATTCACATTCTCATTCACATGAAGTTTTTGTGCACCCTGCCTCAAATTCAGACCCTAATACAGTTACACCTAGTGAAGTAAGAGTGCAATCTGCAGACACAACAAATTTGTCGACTCCTTTGGAGATAAATTATCAAAATATGCAAGCTGAAACCCATTCATCTTCCAGAATGGTGCATTTAAGCTATGATCCGCTCAACAATGAATTGGATAGAATACAAAAAGTAACAGAACAAGCAGTGAAAAACTATGAAGATAGGAAATCGCAGTTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGTAGGAAGTACGATGTTAAATTTCAAGGAATTGAAGTTGAATTTAAACAAAGAAAGACGACTCTGGATACAAATCGTAATGTAGTTCATATGAATAAGTTCTTGGCAGCTGCTTTTAGGTCTAAATGCTCGACTCTTAAACCATCTTGTACATCAGGAATGCTGCCAGATTCAGGTTTCGCACAGCAGCAGTTGCTTCAGCCTTCAAAACAACAAAGTACTAGTTGGCGTTCCCTGCTTGCTGGTTCTTCTTCCTCCACCACGACTAGCTCTCAGCATATGGTAACACCTATACGGGCTGGTTACAGTGCATCAGGATTTTCCCATAATGTTTCTGCAAGATCACCAATTATTGACACCATTTCTTTGCCAGTTGGAAATCCTCAAGCTGGTGTAGGTCAGATACGAGCACCTGCACCACATCTCCAGCCTTATAGACAATGA | 5640 | 0.3766 | MVNGTRSSHNAKDEENNNRRVTQDSEKGKIKSHPNVSDTTGVRRSPRETSSKKNIPNPSSSTRKSGRLENRAPPAPVDKRKSGRIEKKMPSPLRRSGRTRSQSSAGYSDSKSSGSVSSDPKPKKEKSVKQLIFEAKEVNGTEEHHLGTPQIRVKRMTARMYRSLFQLPKEEPNRTDKLNQGGNNGEGQIDECSKESHDCEEISKNGVLSSEDGKSKEMRVDIGSSGSVKDLVEITMAQGSLAPSNVALPSEDGKSKEMRVDTGLSGPVKDLVENTMTLDSLAPSNAATYETGLASESFHPDYCREETLQLLVSSNSILDEDSIRNGVGDRRGENLIPSKSKEITVDMDSDVSSMLAKGDNCNLTPDASSLSRLGGNLMGTDRPSNATLYETGLLPERVQPDCCREETLPSSYSENGVLPSEDGKSKEARVDSGLSVPVKDLVDNTVTLGSLAPSTAATYEIGLAPESIQADYLREKGNSILDEEDLIRISVGHDSSGETLLPSKRKGIMVGMDSDVSAMLAKGDYCNLVPDSGSPSQLGVNLVPDSGSPSQLGGNIMGTNGSCSKQIRLDYNPTVRESCIPSATELQDGHYIDASMLQKDSQIDNEKESGLITNSNSSATQLKERLSSHIGYRCKSDSFSFVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLISTRKCCSHPYLVGPELQPSLNKGLEPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVLILFQSIGGSGRVIGNYLEDLLRPKFGSDSYERIDKSLPPSKKHAAMKKFNDKNNRRFVFLLETCACLPSIKLSSVDSIIIFDSDWNPMNDIRYLQKLTLDSQFELIKIFRLYSSFTVEEKALILSKQCKIFDINSPNWTIFHMLLMWGASCLFDELKVFHDGETSSSNVKSLFGQPLLKEAMHEFSSLLSQDGEHIDSSNCSTLLKVQQNGATYHANSSLLGELKFRVLGEEPTQIFWTKLLEGKQFQWKYLNSSSQRSRKKVYHFDGSVNGPDLVNVGASKKRRKISNNIVEQPSSKSEDEKLSNGIKAGYYGPYLFCLLDQMIDRSQGNNAESEPKSRQHDEQRSLLLLLKPEIRKLCDVLLLPDNVKRMIDNFLEYVMNNHDVNREPFSISQAFQLSLCWTAASLLKHKLDPIASLIQDLNFECKKEEVDYICSMLCCLKKIFLYRTGNYHDTGSPKASGPSNRAYSCTGVAREVELFKKDMSKSIKEIQKKCEKKLKKLHILQEEEKQRLRAAIEEEKAKFEERYKIESAVIRSCSPNDVTRMEKLRVLNTEYEKGIEELKFHHDSCLKDLEDKQLAEIQKFQDKEAAWVEDVKSWADNEYLSIIASKELGTGVESLQTCDQVLPDSGLKNHLAGTAANPPSSMEQKSDGGAVNELSDRELRLSNGPDNNTLLSPQNQNSGGPLDVQGLDRVLSPRACQAASSSDGPNTISIPNPLLEQQTTNGVPLSIPAAVDCHDDIEHLTNAVLGDKRTTSNQQEGAPKTMTELSQGTPVSRTVNVMDPPEQVQHLSVESSPHHDISGEMLHSSRQPELLSSAVDVAPADQSNHVSLIVKPVEQVQQVSSAELPSSHLDSTNLPFTTELEHQPTVVPNQDVQPDSNLEVDSHSHSHEVFVHPASNSDPNTVTPSEVRVQSADTTNLSTPLEINYQNMQAETHSSSRMVHLSYDPLNNELDRIQKVTEQAVKNYEDRKSQLKTDFEKELEELRRKYDVKFQGIEVEFKQRKTTLDTNRNVVHMNKFLAAAFRSKCSTLKPSCTSGMLPDSGFAQQQLLQPSKQQSTSWRSLLAGSSSSTTTSSQHMVTPIRAGYSASGFSHNVSARSPIIDTISLPVGNPQAGVGQIRAPAPHLQPYRQ | 1879 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1384 | 1398 | - | - | |
| Gma13g02887 | 1879 | PANTHER | HELICASE PROTEIN MOM1 | 4 | 1878 | - | - | |
| Gma13g02887 | 1879 | Coils | Coil | 1226 | 1272 | - | - | |
| Gma13g02887 | 1879 | CDD | SF2_C_SNF | 723 | 835 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1445 | 1464 | - | - | |
| Gma13g02887 | 1879 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 728 | 890 | IPR001650 | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 73 | 93 | - | - | |
| Gma13g02887 | 1879 | Gene3D | - | 614 | 640 | IPR038718 | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1 | 130 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 165 | 223 | - | - | |
| Gma13g02887 | 1879 | Coils | Coil | 1704 | 1735 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 190 | 219 | - | - | |
| Gma13g02887 | 1879 | Pfam | Helicase conserved C-terminal domain | 726 | 835 | IPR001650 | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1498 | 1520 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1379 | 1464 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 1411 | 1432 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 51 | 67 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 243 | 267 | - | - | |
| Gma13g02887 | 1879 | Gene3D | - | 641 | 871 | IPR027417 | - | |
| Gma13g02887 | 1879 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 642 | 868 | IPR027417 | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 406 | 430 | - | - | |
| Gma13g02887 | 1879 | Gene3D | - | 1693 | 1774 | - | - | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 95 | 117 | - | - | |
| Gma13g02887 | 1879 | PANTHER | HELICASE PROTEIN MOM1 | 4 | 1878 | IPR039322 | GO:0031507 | |
| Gma13g02887 | 1879 | MobiDBLite | consensus disorder prediction | 8 | 33 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma13g02887 | Gma-Chr13 | 43436388 | 43454067 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma13g02887 | - | K11642 | gmx:100810773 | 3596.98 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma13g02887 | 13 | 43436388 | 43454067 | Gma13g02887 | 13 | 43436388 | 43454067 | ECH | |
| Gma13g02887 | 13 | 43436388 | 43454067 | Gma12g01656 | 12 | 36734046 | 36759877 | GST | |
| Gma13g02887 | 13 | 43436388 | 43454067 | Gma12g00687 | 12 | 6090891 | 6103183 | PCT | |
| Gma13g02887 | 13 | 43436388 | 43454067 | Gma11g01625 | 11 | 17527177 | 17540202 | PCT | |
| Gma12g00687 | 12 | 6090891 | 6103183 | Gma13g02887 | 13 | 43436388 | 43454067 | PCT | |
| Gma11g01625 | 11 | 17527177 | 17540202 | Gma13g02887 | 13 | 43436388 | 43454067 | PCT |