Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01656 ATGGTAAATGGTACTTGTTCTAGTCACAACGCTAAGGATGAGGAAAATAATAACAGGAGGGTGACGCGAAACAGCGAGAAGGGAAAAATCAAATCACATCGTAATGTATCAGATACAACTGGTGTCAGAAGGTCTCCTAGAGAGACATCATCGAAGAAGAACATTCCTAGCCCTTCTTCAAGTACCCGTAAGTCTGGGCGACTTGAAAATAGACCCCCACCAGCTCCTGTCAACAAAAGGAAATCTGAAAGGGTTGAAAAAAAAAAGCCAAGTCCTTTGAGAAGATCTGGAAGAACTAGGAGTCAGTCTTCTACCGGTTATTCTGATTCTAAAAGCTCAGGGTCAGTGAGTTCAGACCCTAAGCCAAAAAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCTAAGGAAGTGAATGGAACTGAGCAGCATGATCTGGGAACACCTCAGGTTAAAGTAAAGAGAATGAATGCTCGTATGTATCGGTCTCTCTTTCAATTACCAAAGGAAGAGCCTAATAGGATCGATAACTTAAATCAAGGTGGCAACAATGGTGGAGGCAAGATTGATGAGTGCTCTGGAGAGTGTCATGATTTTGAAGAAATCTCCAAGaatggtgcgctaccatctgaagatggaaaatcaaaagagatgagagttgacactgggttgagtggtgggcctgtgaaagatctggtagaagataccatgactctagattcattggcaccatctaatgctgcaACTTATGAGACTGGTCTGGCACCTGAAAGCATTCACCCTGATTACTGCAGAGAGGAAACGTTACAGGTGTTAGTGTCAAGCAATTCCATATTGGATGAAGATTCTATCAGGAACAGTGTTGGGGATGATAGAGGTGAAAACTTGATACCTTCTAAGAGCAAGGAAATCACAGTGGATGTGGATTCCGATGTTTCTGCCATGTTGGCGAAGGGTGACAACTGCAACTTGACCCCTGATGCTAGTAGCCTGTCAAGGCTAGGTGGCTATATTATGGGGACTGACTGTCCATCTAATGCCACACTTTATGAGACTGGTTTGCTACCTGAAAGGGTTCAGCCTGATTGTTGCAGAGAAGAAACATTACCGTCAAGCAATTCCAAGAATGGTGTGCTACCATCTGAAGATGGCAAATCAAAAGAGACGAGAGTTGACTCTGGGTTGAGTGTGCCTGTGAAAGATCTAGTAGAAAATACCGTCACTCTCGGTTCATTGGCACCATCTACTGCTGCAACTTATGTGGCTAGTTTGGCACCTGAAAGCTTTCAGACTGATTACCGCAGAGAGAAAGGGAATTCCATATTGGATGAAGAAGACTTAATAAGTAACAGTGTAGGGCATGATAGTAGTGGTGAAACATTGGTACCTTCTAAGAGAAAGGGAATCATGGTTGACATGGATTCAGATGTTTCTGCCATGTTGGCTAAGGGCGATAACTGCAACTTGGTTCCTGATAGTGGTAGCCCTTCACAACTAGGTGGCAATATTATGGGGATTGATGGGTCATGTTCTAAGCGAATAAGGTCGGATTATAATCCTATAGACAGTGAGTCTTGTATCCCTTCTGCAACTGAGCTTCAAGATGGAGATTATATTGATGCAAGCATGCTGCAGAAGGATTCTCAAATCGATAATGAAAAAGAACCTGGTTTAATAAATAATTCCAATAACAGTGTAACTCAACTGAAGGAGAGGTTGTCAAGCCATATTGGATACAGATGCAAGTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAATTCTTCGCTCCTCATCAAAGGTTGATAGTGTTGAGGCTGTTCGTGATGTTCTTATTTCTACCCGAAAGTGTTGTAGTCATCCCTATCTTGTTGGTCCGGAACTGCAACCTTCTCTTAACAAGGGTCTCAAACCAATTGAGTATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCAATGCTCGAGGAGTTGAGAAAGAATGATTTAAGGGTGGTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGGGTTATAGGAAATTATTTGGAAGACCTATTGCGACCAAAATTTGGTTCAGATTCGTATGAACGGATTGATAAAAGTCTTCCGCCTTCCAAGAAGAATGCCGCCATGAAGAAATTTAACGACAAGAACAACAAACGATTTGTGTTTTTGTTGGAAACATGTGCTTGCCTCCCAAGCATCAAGTTGTCATCAGTTGATTCTATAATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAGATCCCTTCAGAAAATAACACTTGATTCACAGTTTGAATTGATAAAAATTTTCCGTTTATATTCATCTTTCACTGTTGAAGAAAAAGCCTTAATCCTTTCTAAGCAATGTAAGATATTTGACATCAATTCTCCAAGCTGGACTACCTGTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGACAAATTGAAAGTTTTTCATGATGGTGAAACTTCTGCATCAAATGTGAAATCCTTGTTTGGACGACCACTTTTGAAAGAAGCAATGCATGAGTTCTCATCCCTACTATCTCAGGATGGAGAACATATTGAATCAAGCAACTTTTCAACTTTATTGGAAGTACAGCAAAATGGGGCAACATACCATGCAAATTCTTCTTTGCTTGGTGAGCTAAAACTTAGGGTACTGGGTGAAGAGCCACCCCAAATTTTTTGGACAAAACTTTTGGAGGGAAAACAGTTTCAGTGGAAGTACTTAAATAGTTCATCTCAGCGAAGTCGGAAGAAAGTTCATCATTTTGATGGTTCAGTCAATAGGCCCGATCTTGTAAATGAAGGAGCAGCAAAGAAGCGCAGGAAAGTTAGTAACAATATTGTTGATCAGCTTTCAAAATCTGAAGACGAAAAGTTATCCAATGGAATCAAGGCAGATGGATCTCAAGGAAATAATGCTGAATCTGAGCAAAAAAGTGGACAGCATGATGAGCAGAGGAGCTTACTTCTCTTGCTGAAGCCAGAGATCAGAAAGCTTTGTGATGTTCTTCTTCTTCCAGATAATGTCAAGAGAATGATTGATAATTTTCTTGAATATATTATGAGCAATCACGATGTCAATAGGGAACCGTTTTCAATATTACAGGCTTTTCAATTATCTCTGTGTTGGACTGCAGCTTCTTTGCTAAAACACAAACTTGACCCCATTGCTTCTCTTATACAAGATTTGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTGTTCTATGTTGCGTTGTTTGAAGAAAATATTTTTATATCGTACAGGAAATCATCATGATACCGGTTCTCCAAAAGCATCTGGACCATCAAACAGAGCATATTCCCGCACAGGAGTTGCACAAGTGGTTGAATTGTTCAAAAAAGATATGTCCAAAAGTATCAAAGAAATTCAGAAGAAGTGTGAAAAGAAGCTGAAGAAGCTACTTCTTTTGCAAGAGGAAGAGAAGCAAAGGTTGAGAGCAGCTATTGAGGAAGAAAAGGCTAAATTCGAGGAAAGGTACAAAATAGAGTCTGCTGTTATTCGATCCTGCTCTCCCAATGATGTTACAAGAATGGAAAAGCTCCGGGTTTTGAATACTGAATATGTAAAAGGAATTGAGGAATTAAAATTTCAGCATGATACATGTCTCAAGGATCTCAAGGACAAGCAATTAGCTGAAATACAGAAGTTTCAAGATAAGGAGGCCGCTTGGGTAAAAGATGTGAAATCTTGGGCAGACAAAGAATATCTAAACATAGTTGCTTCAGAGGAACTTGGAACTGGGGTTGAATCCTTGCAGACTTGTGATCAAGTAAAGCCTGACAATGGTCTAAAGAATCATTTGGCAGGTACTGCTGCGAAGCCTCCTTCATCCATGGAACAAAAATCTGATGGAGGTGTTGTAAATGAACTTTCAGATAGAGAATTAAGACTGAGTAATTGTCCAGATAACAATACCCTTTTGAGTCCACGGAACCAAAATTCTGGAGCCCCATCAAATATCCCAGGTTTAGATAGAGTTTTATCACCAAGGGCTTGTCAAGCTGCTAGTTCAAGTGATGGTCCGAATACAATTTCCTTTCCAAATCCCCTTTTGGAGCAACAAACTACCGATGGAGTCCCTTTGAGTATTCCAGCAGCAGCTGATTGTCGTGATGATATCGAGCATTTAACTAATGCTGTGTTGGGGGATAAAAGAATCACATCAGACCAGCAGAAAGGAGCACCTGAAACCATCACAGAATTGTCCCAGGGGACTCCAGTATCTAGAACAGTTAATGTCTTGGATCCTCCAGAACAAGTGCAGCAATTATCTGTGGGGTCCTCTCCTGACCATGATACATCTGGGGAAATGCATGTGCAACGATTACCTTCCGCAGAGCTCCCTTCTTCTCATCTGGATTCAACTAATTTACCTTTGACAACCGAAATTGAACATCAGCCAACTGTGGTTCCTAATCAAGATGTGCAACCTGATTCAAATTTGGAACTCTATTCACATTCACATGAAGTTGTTGTGCATCCTGCCTCAAATTCAGATCCTAATACAGTTACACCAAGTGAAGTAAGAGTGCAATCTGCAGACACAATAAATTTGTCGATTCCTTTAGAGATCAATTATCAACATATGCAAGCTGAAACCCATTCAGCTTCCAGAATGCTGCATTTAAGCTATGATCCACTCAACAATGAATTGGATAGAATACAAAAAGTAACAGAGCAAACAATGAAAAACTATGAAGATAAGAAATTGCTGCTGAAAACTGATTTTGAAAAGGAATTAGAGGAACTCCGCAGGAAGTACGATATTAAATTTCAAGGAATTGAAGTTGAATTTAAACAAAGAAAGATGGCTCTGGAGACAAATCGGAATGTAGTTCATATGAATAAGTTCTTGGCAGATGCTTTTAGGTCTAAATGCTCGACTCTTAAATCATCTTGTACATCAGGAATGCTGCCAGATTCAGATATTGCACAGCAGCAGTTGCTTCAGCCTTCAAGACAACAAAGTGCTAGTTGGCGTTCCCTGGTTAATGGTTCTTCTTCCTGTGGACCTTCTGCTACCAGTCTGCAGAGTCCCTCCACAACGACTGGCTCTCAGCATATGGTAACACCTATACGGCCTGGTTACAGTGCATCAGTATTTCCCTCCAATGTTTCTGCAAGATCACCAATTATCAACACCATCTCTTTATCAGTTGGAAATCCTCAGGCTGGTGGTGGTCAGATACGAGCACCAGCCCCACATCTCCAGCCTTATAGACCATGA 5346 0.3926 MVNGTCSSHNAKDEENNNRRVTRNSEKGKIKSHRNVSDTTGVRRSPRETSSKKNIPSPSSSTRKSGRLENRPPPAPVNKRKSERVEKKKPSPLRRSGRTRSQSSTGYSDSKSSGSVSSDPKPKKEKSVKQLIFEAKEVNGTEQHDLGTPQVKVKRMNARMYRSLFQLPKEEPNRIDNLNQGGNNGGGKIDECSGECHDFEEISKNGALPSEDGKSKEMRVDTGLSGGPVKDLVEDTMTLDSLAPSNAATYETGLAPESIHPDYCREETLQVLVSSNSILDEDSIRNSVGDDRGENLIPSKSKEITVDVDSDVSAMLAKGDNCNLTPDASSLSRLGGYIMGTDCPSNATLYETGLLPERVQPDCCREETLPSSNSKNGVLPSEDGKSKETRVDSGLSVPVKDLVENTVTLGSLAPSTAATYVASLAPESFQTDYRREKGNSILDEEDLISNSVGHDSSGETLVPSKRKGIMVDMDSDVSAMLAKGDNCNLVPDSGSPSQLGGNIMGIDGSCSKRIRSDYNPIDSESCIPSATELQDGDYIDASMLQKDSQIDNEKEPGLINNSNNSVTQLKERLSSHIGYRCKFVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLISTRKCCSHPYLVGPELQPSLNKGLKPIEYLDFDLKASGKLQLLDSMLEELRKNDLRVVILFQSIGGSGRVIGNYLEDLLRPKFGSDSYERIDKSLPPSKKNAAMKKFNDKNNKRFVFLLETCACLPSIKLSSVDSIIIFDSDWNPMNDIRSLQKITLDSQFELIKIFRLYSSFTVEEKALILSKQCKIFDINSPSWTTCHMLLMWGASCLFDKLKVFHDGETSASNVKSLFGRPLLKEAMHEFSSLLSQDGEHIESSNFSTLLEVQQNGATYHANSSLLGELKLRVLGEEPPQIFWTKLLEGKQFQWKYLNSSSQRSRKKVHHFDGSVNRPDLVNEGAAKKRRKVSNNIVDQLSKSEDEKLSNGIKADGSQGNNAESEQKSGQHDEQRSLLLLLKPEIRKLCDVLLLPDNVKRMIDNFLEYIMSNHDVNREPFSILQAFQLSLCWTAASLLKHKLDPIASLIQDLNFECKKEEVDYICSMLRCLKKIFLYRTGNHHDTGSPKASGPSNRAYSRTGVAQVVELFKKDMSKSIKEIQKKCEKKLKKLLLLQEEEKQRLRAAIEEEKAKFEERYKIESAVIRSCSPNDVTRMEKLRVLNTEYVKGIEELKFQHDTCLKDLKDKQLAEIQKFQDKEAAWVKDVKSWADKEYLNIVASEELGTGVESLQTCDQVKPDNGLKNHLAGTAAKPPSSMEQKSDGGVVNELSDRELRLSNCPDNNTLLSPRNQNSGAPSNIPGLDRVLSPRACQAASSSDGPNTISFPNPLLEQQTTDGVPLSIPAAADCRDDIEHLTNAVLGDKRITSDQQKGAPETITELSQGTPVSRTVNVLDPPEQVQQLSVGSSPDHDTSGEMHVQRLPSAELPSSHLDSTNLPLTTEIEHQPTVVPNQDVQPDSNLELYSHSHEVVVHPASNSDPNTVTPSEVRVQSADTINLSIPLEINYQHMQAETHSASRMLHLSYDPLNNELDRIQKVTEQTMKNYEDKKLLLKTDFEKELEELRRKYDIKFQGIEVEFKQRKMALETNRNVVHMNKFLADAFRSKCSTLKSSCTSGMLPDSDIAQQQLLQPSRQQSASWRSLVNGSSSCGPSATSLQSPSTTTGSQHMVTPIRPGYSASVFPSNVSARSPIINTISLSVGNPQAGGGQIRAPAPHLQPYRP 1781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01656 1781 CDD SF2_C_SNF 665 777 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1337 1359 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 204 229 - -
Gma12g01656 1781 Coils Coil 1152 1198 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 204 219 - -
Gma12g01656 1781 Gene3D - 1584 1665 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1702 1728 - -
Gma12g01656 1781 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 670 832 IPR001650 -
Gma12g01656 1781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 582 809 IPR027417 -
Gma12g01656 1781 Coils Coil 1588 1608 - -
Gma12g01656 1781 Gene3D - 583 813 IPR027417 -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1427 1448 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 12 50 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 96 117 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 51 67 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 74 92 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 948 1012 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 366 380 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 948 992 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1431 1448 - -
Gma12g01656 1781 PANTHER HELICASE PROTEIN MOM1 4 1781 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1296 1395 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1 127 - -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 1371 1395 - -
Gma12g01656 1781 Gene3D - 566 582 IPR038718 -
Gma12g01656 1781 PANTHER HELICASE PROTEIN MOM1 4 1781 IPR039322 GO:0031507
Gma12g01656 1781 Pfam Helicase conserved C-terminal domain 668 777 IPR001650 -
Gma12g01656 1781 MobiDBLite consensus disorder prediction 365 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01656 Gma-Chr12 36734046 36759877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01656 - K11643 gmx:100781893 3395.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01656 12 36734046 36759877 Gma12g01656 12 36734046 36759877 ECH
Gma13g02887 13 43436388 43454067 Gma12g01656 12 36734046 36759877 GST
Gma12g01656 12 36734046 36759877 Gma12g00687 12 6090891 6103183 PCT
Gma12g01656 12 36734046 36759877 Gma11g01625 11 17527177 17540202 PCT
Gma12g00687 12 6090891 6103183 Gma12g01656 12 36734046 36759877 PCT
Gma11g01625 11 17527177 17540202 Gma12g01656 12 36734046 36759877 PCT