Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02728 ATGGCGACACTGGATTCCGACGTGACCATGGTTCCGGCCGGCGAACCCTCCACCAGCGCCGGTCCTTCTTCGTCCACCAAGAAGCCGAAGCGATTCGAGATCAAGAAGTGGAATGCCGTTTCTCTCTGGGCTTGGGATATTGTTGTGGATAATTGCGCTATTTGCCGCAACCATATCATGGATCTCTGTATTGAGTGCCAGGCCAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTAGCTTGGGGAGTTTGTAACCATGCTTTTCACTTCCATTGCATAAGCCGATGGCTCAAGACCCGTCAAGTATGTCCTCTAGATAATAGCGAGTGGGAGTTTCAGAAATACGGTCACTAG 357 0.5182 MATLDSDVTMVPAGEPSTSAGPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02728 118 PANTHER RING BOX 1 118 - -
Gma13g02728 118 CDD mRING-H2-C3H2C2D_RBX1 50 111 - -
Gma13g02728 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 118 IPR013083 -
Gma13g02728 118 SUPERFAMILY RING/U-box 30 115 - -
Gma13g02728 118 Pfam RING-H2 zinc finger domain 50 108 IPR024766 GO:0008270
Gma13g02728 118 ProSiteProfiles Zinc finger RING-type profile. 63 108 IPR001841 -
Gma13g02728 118 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RBX1 1 118 - -
Gma13g02728 118 MobiDBLite consensus disorder prediction 12 26 - -
Gma13g02728 118 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02728 Gma-Chr13 41849371 41851698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02728 K03868 - gmx:100526919 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02728 13 41849371 41851698 Gma12g01836 12 39054498 39056782 GST
Gma13g02728 13 41849371 41851698 Gma12g00895 12 8900026 8902717 PCT
Gma13g02728 13 41849371 41851698 Gma06g02707 06 50733525 50736712 PCT
Gma12g00895 12 8900026 8902717 Gma13g02728 13 41849371 41851698 PCT
Gma06g02707 06 50733525 50736712 Gma13g02728 13 41849371 41851698 PCT