LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g02678	ATGAAAAAGTTGAATTCAGATTTTGTTATATGCGCTTCTGGGGTACCTTGTGGTAATCTACCAAGACATATATATAAACTTGATTGCAAAGAAGCATCCACGGCAGGCATGGTCAACAGTGAGGTTTCTACACGTCTTGAGGGAAAATATGCTGCAATTGTGGTGTGCTGGCTTCTTGGCAATGGATGTCTTTTCTCGTGGAACAGTATGCTGACAATAGAAGATTACTACGGTTACTTGTTTCCGAAATACCACCCCTCTAGGGTGCTTACTCTTGTATATCAGCCATTCGCAGTTGGAACACTTGCGATACTGGCATATAATGAGGCCAAACTCAATACTCGACTAAGGAATCTGTTTGGATATATACTTTTTTTCATAAGCACTTTGTTGGTGTTAATTTTGAATTCAGCAACATCTGGTAAAGGAGGACTTGGAACTTTCATCGGTATATGTGCACTTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTCTCCTACATGAAACCAGAATTCATTCAATCTTTCCTTGCTGGTTTGGCAGCATCCGGTGTATTAACCTCTGCTTTGAGGTTGGTTACAAAAGCAGCATTTGAGAATTCTAAGGACGGTCTCCGCAAAGGAGCCATTCTGTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTGTTCTCTATGCATTTATTTTCCCTAAAATACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCAGCTGGTGGCATCCGGACATTACCTGGAACAGAGAAGGAATATACGAAAGATCCAGAGAGGAAGGGAAACAAGCAATTGTTATTAGAAAATATTGACTATGCACTTGACACGTTCCTAATTTATATGCTAACACTGTCTATTTTCCCTGGATTCCTCTTAGAAGATACTGGATCACATAGTTTAGGCACCTGGTATGCTCTTGTTTTAATTGCTATGTATAATGTGTGGGATCTGATTGGAAGATACATTCCACTCTTGAAATGCTTGAAGTTGGAGTCCCGAAAGTTGATCACTATAACAATTCTTAGCCGTTTCTTACTTGTTCCAGCATTTTATTTCACTGCTAAGTATGGTGACCAAGGGTGGATGATAGTGTTAACGTCCTTCTTGGGGCTATCCAATGGTTACCTTACTGTCTGTGTTCTAACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTGTGGTTAATAGGTCAATCCAAAATTCAGTGA	1359	0.4091	MKKLNSDFVICASGVPCGNLPRHIYKLDCKEASTAGMVNSEVSTRLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYGYLFPKYHPSRVLTLVYQPFAVGTLAILAYNEAKLNTRLRNLFGYILFFISTLLVLILNSATSGKGGLGTFIGICALSGAFGVADAHVQGGMVGDLSYMKPEFIQSFLAGLAASGVLTSALRLVTKAAFENSKDGLRKGAILFFAISTFFELLCVVLYAFIFPKIPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGTEKEYTKDPERKGNKQLLLENIDYALDTFLIYMLTLSIFPGFLLEDTGSHSLGTWYALVLIAMYNVWDLIGRYIPLLKCLKLESRKLITITILSRFLLVPAFYFTAKYGDQGWMIVLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGQSKIQ	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g02678	452	Pfam	Nucleoside transporter	160	444	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PANTHER	EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2	38	449	IPR030200	-
	Gma13g02678	452	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	385	401	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	422	446	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	158	180	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	186	206	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PIRSF	ENT	26	449	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma13g02678	452	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	38	449	IPR002259	GO:0005337\|GO:0016021\|GO:1901642

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g02678	Gma-Chr13	41460663	41466495	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma13g02678	35	450	Organic Solute Cotransporters	AT4G05120	68.990	0.0	595

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g02678	K15014		-	gmx:100798899	803.127

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma13g02678	13	41460663	41466495	Gma13g02678	13	41460663	41466495	ECH
	Gma13g02678	13	41460663	41466495	Gma12g00945	12	9812619	9816049	PCT
	Gma13g02678	13	41460663	41466495	Gma06g02673	06	50300531	50303797	PCT
	Gma12g00945	12	9812619	9816049	Gma13g02678	13	41460663	41466495	PCT
	Gma06g02673	06	50300531	50303797	Gma13g02678	13	41460663	41466495	PCT