LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g00945	ATGGAGAACAATGAGCCTCCAAGGCGTCTTGAGGGAAAACATGCTGCAATGGCAGTTTGCTGGCTTCTTGGCACTGGGTGCCTTTTCGCGTGGAACAGTATGCTGACTATAGAAGATTACTATGTTTACTTGTTTCCGAAATACCACCCGTCTAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTAGCAATACTGGCTTACAAAGAGGACAGAATCAATACAAGGATAAGAAACTTATTTGGATATACTCTTTTCTTCATAAGCACTTTGTCGATCTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGCCTTGGAACTTTTATTGGTATATGCGTAATTAGTGGTGCATTTGGAATAGCAGATGCTCATACGCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGCTTGGCAGCATCAGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCCTTTGAAAATTCTAAGAATGGTCTTCGCAAAGGAGCCATTATGTTCTTTGCCATATCAACATTCTTTGAGCTTCTTTGTGTTCTTCTCTATGCGTTTGTATTCCCTAAATTACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACAGTATCAGCTGACCTTGCTGCAGGTGGCATCCAGATCCCATCTGGAAGAGCCAATCAATATGAAAAAGAAATAGATCGCAAAGGAAATAAGAAACTGTTATTGGAAAACATTGATTATGCACTTGATTTGTTCCTAATATATGCGCTTACACTTTCAATTTTCCCTGGATTCTTATCAGAAGATACTGGATCACACAGTTTAGGCACCTGGTATGCACTTGTTTTAATAGCTATGTACAATGTGTGTGATCTGATTGGAAGATACATTCCACTCTTGAAATTTCTAAAGTTGGAATCTCGAAAAAAGCTGACCACAGCAATTGTTAGTCGCTTGTTATTTGTGCCGGCGTTTTATTTTACTGCGAAGTATGGCACACAGGGCTGGATGATAATGTTGACATCTTTTTTGGGGTTATCCAATGGCTACTTCACTGTTTGTGTTCTCACTTCAGCACCCAAAGGTTACAAGGGACCGGAACAAAATGCCTTGGGAAATTTGTTGGTGTTGTTTCTTCTTGGAGGTATCTTTGCAGGGGTAACACTTGATTGGTTTTGGTTAATAGGTAAAGGGTGGTGA	1245	0.4056	MENNEPPRRLEGKHAAMAVCWLLGTGCLFAWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAVGTLAILAYKEDRINTRIRNLFGYTLFFISTLSILILDLATSGKGGLGTFIGICVISGAFGIADAHTQGGMVGDLSYMLPEFIQSFLAGLAASGALTSALRLITKAAFENSKNGLRKGAIMFFAISTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQIPSGRANQYEKEIDRKGNKKLLLENIDYALDLFLIYALTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVCDLIGRYIPLLKFLKLESRKKLTTAIVSRLLFVPAFYFTAKYGTQGWMIMLTSFLGLSNGYFTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWFWLIGKGW	414

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g00945	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	150	170	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	270	287	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	326	343	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	400	414	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	PANTHER	EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2	3	413	IPR030200	-
	Gma12g00945	414	Pfam	Nucleoside transporter	123	408	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	SUPERFAMILY	MFS general substrate transporter	9	407	IPR036259	-
	Gma12g00945	414	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	3	413	IPR002259	GO:0005337\|GO:0016021\|GO:1901642
	Gma12g00945	414	PIRSF	ENT	2	412	IPR002259	GO:0005337\|GO:0016021\|GO:1901642

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g00945	Gma-Chr12	9812619	9816049	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma12g00945	3	412	Organic Solute Cotransporters	AT4G05120	69.756	0.0	594

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g00945	K15014		-	gmx:100784933	798.119

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00945	12	9812619	9816049	Gma12g00945	12	9812619	9816049	ECH
	Gma12g00945	12	9812619	9816049	Gma06g02673	06	50300531	50303797	GST
	Gma13g02678	13	41460663	41466495	Gma12g00945	12	9812619	9816049	PCT
	Gma12g00945	12	9812619	9816049	Gma13g02678	13	41460663	41466495	PCT