Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02653 ATGGAACCCCAAATTCTCGGTTACAACAACAATGGCAACTGCCTCAGTGACTCTGATATCATTACCTGGTTTGAAGACGTGTCCAAGAACGCTGGTTCTGTTCAGACTCAGACACTGTGCAAGATTCTGAAGCAGAACTGTGGGGTTGAATATCTAAAGAAATGGCTGGGGGACTACAATATCTCAGAAATGGATGCAAGTGCCTTGGAATCTCTTTTTACTTCTGTGGTTCCCCTTGCTTCACATAAAGATTTCGAGCCATATATCCGAAACATTGCAGATGGAGACACAGCTCCTATACTCACACAACAACCCATAACCACTCTTTCCTTAAGCTCTGGAACCACAGAGGGAAAGCAAAAGTTGGTACCCTTTACCCGCCATAGTGCTCAAACGACCCTTCAAACATTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTTATATACAGCAGCAACCATTTCAAAACAAAAGGAGGCTTAACTGTTGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAACCAAACAGGAGAAAACAAAGGCATTCACTTGCAGCCCCTATGAAGTAATTTCTGGAGGGGACTATAAACAATCCACGTATTGTCACCTCCTTCTTGGCCTTTTCTTCTCTGATCACGTAGAGTTTATTTCCTCAGCTTTTGTCTATGGCATAGTGCAAGCATTTTGCACCTTCGAAGAGGTTTGGAAAGACCTTTGCAATGACATAAGAGATGGCACTTTGAGTTCAAGAATCAAGTTACCCAAAATGAGAGAAGCTGTTTTGGGTATAATCACTTCAAACCCCTCTTTGGCCTCAAAACTAGAAGCAACTTGCTTGGAGCTAGAAGATGTGGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAACGCAAAGTTCGTTTGTTCCATAATGACAGGCTCTATGCAACCATATTTGAAAAAGCTAAGGCATTATACAAATGGGGTGCCACTAATAAGTGGTGACTATGGTTCAACTGAGAGTTGGATAGGGGTTAATGTGGATCCTAGTTTGGCTCCAGAGAAAGTAACCTTTGCTGTAGTACCCACGTTTTCTTACTTTGAGTTCATACCACTTTATTATAGACAGAAACAAGGTTGCAGCTCAGTAGCTGATCATGATTTCATGGAAGAGGAGCCAATCCCACTATCCCAGGTTAAAGATGGCCAACAGTACGAAATAGTGCTCACAACTTTTACTGGGCTGTACAGGTGCAGACTAGGAGATGTGGTGGAAGTGGCAGGTTTTCACAATGGGAGCCCAAAATTGAACTTCATATGCAGAAGAAAACTAATTCTAACCGTGAATATAGACAAGAACACAGAGAGAGACCTTCAAATAGTGGTAGAGAAAGGGTCACAGCTCCTAAACAAGGCCAAAGCTGAGCTCGTTGATTTTACAAGCTATGCAGATGTCTCAAACCAGCCAGGTTGTTACGTCATTTTCTGGGAGATCAAAGGTGAGGCCGAGGATAAGGTACTTGAGGCATGCTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTGGTTGCAAGGAAAACCAGTTCAATAGGGCCTTTGATGCTGTGCATTGTAGAGAGAGGAACTTTTAAAAAGATTTTGGATTATTTCGTGGAGAATGGGGCAGGATTGGGCCAGTTCAAGACCCCCAGGTGCACTAACAACCCGGTTCTCCTCAAAATTCTTAGTGAATGCACCATTCAAACATTTCGCAGCACTGCTTATATATAG 1800 0.4294 MEPQILGYNNNGNCLSDSDIITWFEDVSKNAGSVQTQTLCKILKQNCGVEYLKKWLGDYNISEMDASALESLFTSVVPLASHKDFEPYIRNIADGDTAPILTQQPITTLSLSSGTTEGKQKLVPFTRHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSNHFKTKGGLTVGTATTHYYASEEFKTKQEKTKAFTCSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFVYGIVQAFCTFEEVWKDLCNDIRDGTLSSRIKLPKMREAVLGIITSNPSLASKLEATCLELEDVDWFGLVPKLWPNAKFVCSIMTGSMQPYLKKLRHYTNGVPLISGDYGSTESWIGVNVDPSLAPEKVTFAVVPTFSYFEFIPLYYRQKQGCSSVADHDFMEEEPIPLSQVKDGQQYEIVLTTFTGLYRCRLGDVVEVAGFHNGSPKLNFICRRKLILTVNIDKNTERDLQIVVEKGSQLLNKAKAELVDFTSYADVSNQPGCYVIFWEIKGEAEDKVLEACCREMDAAFVDHGYVVARKTSSIGPLMLCIVERGTFKKILDYFVENGAGLGQFKTPRCTNNPVLLKILSECTIQTFRSTAYI 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02653 599 Pfam GH3 auxin-responsive promoter 23 578 IPR004993 -
Gma13g02653 599 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 15 598 - -
Gma13g02653 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 598 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02653 Gma-Chr13 41263942 41268299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02653 18 596 EF-hand Containing Proteins AT1G23160 34.848 9.78e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02653 K14487 - gmx:100810952 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02653 13 41263942 41268299 Gma12g01907 12 39709405 39714372 GST
Gma13g02653 13 41263942 41268299 Gma12g00971 12 10230649 10233102 PCT
Gma13g02653 13 41263942 41268299 Gma06g02650 06 49998968 50003781 PCT
Gma12g00971 12 10230649 10233102 Gma13g02653 13 41263942 41268299 PCT
Gma06g02650 06 49998968 50003781 Gma13g02653 13 41263942 41268299 PCT