Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01907 ATGGAGCCCCCAGTTCTCAGTTTCAATAGCAATGACACCACCAACAATGGCAACTGCACCACTGACTTTGATATCATTACCTGGTTTGAAGACGTTTCCAAGAACGCTGGTTCTGTTCAGATTCAGACACTCTGCAAGATTCTTAAGCAGAACTATGGGGTTGAATATCTAAAGACATGGTTGGGGAGCTACAATATCTCAGAAATGGATGCATGTGCCTTGGAATCTCTTTTTACTTCTGTGGTTCCCCTTGCTTCACATGCAGATTTCGAGCCATATATCCAAAAAATTGCAGATGGAGACACAGGTCCTATACTCACACAACAACCCATAACCACTCTCTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAGAAGTTCGTACCCTTTACCCGCCATAGTGCTCAAACGACCCTGCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCGACAAGGGAAGGAGGTAGGATTCTTGAATTTATATACAGCAGCAATCAGTTCAAAACAAAAGGAGGATTAAAAGTTGGAACAGCCACAACACACTACTATGCAAGTGAAGAATTCAAAACCAAACAAGAGAAAACAAAGGCATTCACTTGCAGCCCCTATGAGGTTATTTCTGGGGGGGACTATAAACAATCCACGTACTGCCACCTCCTTCTTGGGCTCTTCTTCTCTGATCACGTAGAGTTTATTTCCTCAGCTTTTGCCTATGGCATAGTGCAAGCATTTTGCACTTTCGAAGAGGTTTGGAGAGACCTTTGCAATGACATAAGAGATGGCACTTTGAGTTCAAGAATCAAGTTACCCCAAATGAGAGAGGCTGTTTTGGGTACAATAACTTCAAACCCCTCTTTGGCCTCAAAACTAGAAGAAGCTTGCTTGGAGCTAGAAGTGGTGGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAATGCCAAGTACCTTTATTCCATAATGACAGGTTCTATGCAACCTTATTTGAAAAAGCTTAGGCATTATGCAAATGGGGTGCCACTAATAAGTGCTGACTATGGTTCAACTGAGAGTTGGATAGGGGTTAATGTGGATCCTTGTTTGGCTCCTGAGAAAGTAACCTTTGCTGTAGTACCGACGTTCTCTTACTTTGAGTTCATACCACTTTATTATAGACAGAAACAAGATTTCAGCTCAGTAGCTGATCATGATTTCATGGAAGACGAGCCAATCCCACTATCCCAGGTTAAAGTTGGCCAAGAGTACGAAATAGCGCTCACAACTTTTACTGGGCTGTATAGGTGCAGACTAGGAGACGTGGTGGAAGTGGCAGGTTTTCACAACGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAACTAATTCTAACCGTGAATATAGACAAGAACACAGAGAGAGACCTTCAAATAGTGGTAGAGAAAGGGTCACAGCTGCTAAACAAGGCAAAAGCTGAGCTTGTTGATTTTACAAGCCATGCAGATGTCTCAAACAACCCAGGTTGTTACGTTATTTTCTGGGAAATCAAAGGTGAGGCCGAGGATAAGGTACTTGAGGCATGCTGCAGGGAAATGGATGCTGCTTTTGTTGACCATGGCTATGTGGTCGCAAGGAAAACAAGTTCAATAGGGCCTTTGTTGCTTTGCATTGTAGAGAGAGGGACTTTTAAAAAGATTTTGGATTATTTCGTGGAGAATGGGGCAGCACTGGGCCAGTTCAAGACCCCTAGGTGCACTAACAACCCGGTCCTCCTCAAAATTCTTAGTGCATGCACCATTAAAACATTTCGCAGCACTGCTTATATATAG 1815 0.4309 MEPPVLSFNSNDTTNNGNCTTDFDIITWFEDVSKNAGSVQIQTLCKILKQNYGVEYLKTWLGSYNISEMDACALESLFTSVVPLASHADFEPYIQKIADGDTGPILTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLKVGTATTHYYASEEFKTKQEKTKAFTCSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFAYGIVQAFCTFEEVWRDLCNDIRDGTLSSRIKLPQMREAVLGTITSNPSLASKLEEACLELEVVDWFGLVPKLWPNAKYLYSIMTGSMQPYLKKLRHYANGVPLISADYGSTESWIGVNVDPCLAPEKVTFAVVPTFSYFEFIPLYYRQKQDFSSVADHDFMEDEPIPLSQVKVGQEYEIALTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTERDLQIVVEKGSQLLNKAKAELVDFTSHADVSNNPGCYVIFWEIKGEAEDKVLEACCREMDAAFVDHGYVVARKTSSIGPLLLCIVERGTFKKILDYFVENGAALGQFKTPRCTNNPVLLKILSACTIKTFRSTAYI 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01907 604 Pfam GH3 auxin-responsive promoter 28 583 IPR004993 -
Gma12g01907 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 603 IPR004993 -
Gma12g01907 604 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 20 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01907 Gma-Chr12 39709405 39714372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01907 24 601 EF-hand Containing Proteins AT1G23160 34.570 1.28e-115 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01907 K14487 - gmx:100814683 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01907 12 39709405 39714372 Gma12g01907 12 39709405 39714372 ECH
Gma13g02653 13 41263942 41268299 Gma12g01907 12 39709405 39714372 GST
Gma12g01907 12 39709405 39714372 Gma12g00971 12 10230649 10233102 PCT
Gma12g01907 12 39709405 39714372 Gma06g02650 06 49998968 50003781 PCT
Gma12g00971 12 10230649 10233102 Gma12g01907 12 39709405 39714372 PCT
Gma06g02650 06 49998968 50003781 Gma12g01907 12 39709405 39714372 PCT