Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02557 ATGGATGCATCTTCTATGCACATAGCAATGTTTCCATGGTTTGCCATGGGACACCTAACTCCATATCTTCACCTCTCAAACAAATTAGCAAAGAGGGGACACAGAATCTCCTTCTTCATCCCCAAAAGAACGCAACACAAGTTAGAGCAATTCAACCTGTTCCCACATCTCATCACCTTTTACCCTATCAATGTTCCTCATGTTGAAGGCCTTCCCCATGGCGCAGAAACCACTTCTGATGTCTCTTTCTCTTTAGGTCCACTCATTATGACAGCCATGGATCGCACTGAGAAAGACATAGAGCTTCTTCTCATTGAGTTAAAGCCACAAATTGTTTTCTTTGACTTCACATATTGGCTACCAAACTTGACTCGCCGCTTGGGAATCAAATCTTTTCAATACATGATTGTTAGCCCAGCAACAGTAGCTTACAATGCATCCCCACCAAGGATGCAAAACAGTGTTAACTTAACTGAAGTTGATCTTATGCAACCCCCTCTTGGGTACCCTGTCTCATCCATCAAGCTTCATGCACATGAAGCTAAGTTTCTTGCTTCTAAGAGGAATTGGGAGTTTGGTAGTGGTGTTCTCTTTTATGACCGTCTTTACGGCGGTTTAAGCCTATCTGATGCAATTGGATTCAAAGGTTGCAGGGAAATTGAAGGGCCTTATGTTGATTACCTTGAAGAACAGTTTGGGAAGTCTGTTCTGCTTTCAGGACCTATCATACCTGAGCCACCCAACACTGTTTTAGAGGGAAAATGGGGTTCATGGCTTGAAAGGTTCAAGCCTGATTCAGTTATTTTCTGTGCTCTTGGTAGTGAATGGAAATTACCACATGATCAATTCCAAGAATTTCTGTTGGGTCTTGAACTCACTGGCCTTCCATTTTTGGCTGTTTTAAAAACTCCTATAGGGTTTGAGACACTTGAAGCTGCTCTCCCAGAAGGGTTCAAGGAAAGGGTTGAAGAGAGAGGAATTGTCCACGGTGGATGGATACAGCAACAGCTGATTTTGGAACACCCTTCAGTGGGTTGCTTCATAACACATTGTGGTGCTGGTTCATTAACTGAGGCACTAGTGAATAAGTGCCAAATAGTGTTACTGCCACAGGTAGATGGTGATCATATAGTTAATGCAAGGATGATGGGTGAAAACTTAAAGATTGGGGTTGAAGTGGAGAAGGGTGAAGAAGATGGCTGGTTCACGAAGGAGAGTGTAAGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAAGTTGGCAGAGAAGTGAGGACAAATCATGCAAAATTGAGGAACTTCTTAGTAAGCCACAATTTGGAGTCCGCATGTGTTGATGGATTTTGTCAGAAGCTTCGAGATTTACTCAAGTGA 1377 0.427 MDASSMHIAMFPWFAMGHLTPYLHLSNKLAKRGHRISFFIPKRTQHKLEQFNLFPHLITFYPINVPHVEGLPHGAETTSDVSFSLGPLIMTAMDRTEKDIELLLIELKPQIVFFDFTYWLPNLTRRLGIKSFQYMIVSPATVAYNASPPRMQNSVNLTEVDLMQPPLGYPVSSIKLHAHEAKFLASKRNWEFGSGVLFYDRLYGGLSLSDAIGFKGCREIEGPYVDYLEEQFGKSVLLSGPIIPEPPNTVLEGKWGSWLERFKPDSVIFCALGSEWKLPHDQFQEFLLGLELTGLPFLAVLKTPIGFETLEAALPEGFKERVEERGIVHGGWIQQQLILEHPSVGCFITHCGAGSLTEALVNKCQIVLLPQVDGDHIVNARMMGENLKIGVEVEKGEEDGWFTKESVSKAVKIVMDDENEVGREVRTNHAKLRNFLVSHNLESACVDGFCQKLRDLLK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02557 458 PANTHER GLYCOSYLTRANSFERASE 3 455 - -
Gma13g02557 458 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 332 418 IPR002213 GO:0008194
Gma13g02557 458 CDD GT1_Gtf-like 6 433 IPR002213 GO:0008194
Gma13g02557 458 Gene3D Glycogen Phosphorylase B; 2 254 - -
Gma13g02557 458 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2''-O-GLUCOSYLTRANSFERASE-RELATED 3 455 - -
Gma13g02557 458 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 438 - -
Gma13g02557 458 Gene3D Glycogen Phosphorylase B; 255 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02557 Gma-Chr13 40442067 40443631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02557 3 458 Glycosyltransferase AT5G54010 48.359 3.01e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02557 K22794 - gmx:100808470 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02557 13 40442067 40443631 Gma12g01188 12 15228350 15230936 PCT