Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01188 ATGGCTACCGGATTAGCCATTCTGGAATTACTATTCAAAAATTCATGTTTTGGAACCCACCCTGACCCCATCCAAACTAGAACCCACCACCCCCTTCCACACCAGAACTCAAACTCACACCCACTAGGAAGGAACGAAAGAGGAAGTAGGGGCATACCTTACAAGACGAAGGAGGAAGATAATGAAAGAGGAAGCAAGGGGAAGTGGTGCGCTGTCAGGGGGAGGGAGGTGTTAGGCTTAGGAGGGAAGGAGATGTTAGAGTTGGGGAAGGAGTACTATTTCATTAAGGATGCAGCTCCTTTGCACATAGCAATGTATCCATGGTTTGCTATGGGGCACCTCACCCCATTTCTCCACCTTGCCAACAAGTTAGCCAAAAGGGGACACAAAATCTCCTTCTTCATACCCAGAAGAACACAAGCCAAGTTAGAAGACCTCAATCTTCACCCAAACCTCATCACCTTTGTCCCCATCAATGTTCCTCACGTTGATGGTCTTCCTTATGATGCAGAAACCACTTCAGATGTTCCCTCCTCTTTGTTCCCACTCATTGCCACTGCCATGGACCTCACAGAGAAAAACATTGAACTTCTCCTCCTTGATCTCAAACCACACATCGTTTTGTTCGATTTTTCCACATATTGGCTACCAAACTTGGCTCGTAGAATAGGAATAAAGTCTCTTCAGTACTGGATTATTAGCCCTGCAACAGTAGGGTACATGGCATCCCCAGCTAGACAAAGAGAAGATGACATGAGAAAACCACCTTCAGGGTTCCCTGATTGTTCCATCAAGCTGCATGCACATGAAGTTCGGTTCCTTGCTGCAGCAAGGAAACTAGAGTTTGGCAATGGTGTTCTTTTCTATGATCGTATCTCAGTTGGTGCAGATTTGTCTGATGCTATTGGATTCAAAGGTTGTAGAGAAATTGAAGGGCCTTATGTGGACTATCTAGAGACACAATTTGGTAAGCCCGTTTTGCTTACAGGTCCTCTTGTGCCCGAGCCATCAAATTCAACTTTGGACGCAAAATGGGGTGAATGGCTTGGTAGATTCAAAGCTGGTTCAGTGATTTACATTGCATTTGGAAGTGAACACTCTTTGCAGCAAAACCAATTGAATGAGTTGTTGTTGGGTCTTGAGCTAACAGGAATGCCATTTTTTGCAGCACTTAAGCCCCCTATTGAGTTTGAGTCCATTGAGAAAGCTCTCCCAaaagggttcaaagaaagggttcaagaaagAGGGGTTGTGTATGGGGGGTGGGTGCAGCAACAGTTGATCTTGGCACACCCTTCTGTTGGGTGCTTCATAACTCACTGTGGTGGAGCTTCTCTAACTGAGGCACTTGTGAACCGGTGTCAGTTGGTGCTGTTGCCACGACTTGGTTCCGATTTCATCATCAATGCAAGAACCATGGGGGGAAAATTGAGGGTTGGTGTGGAAGTTGAGAAAGGGGAAGAAGATGGTTTGTTCACAAAGGAAAGTGTGTGTAAAGCTGTGAAAACTGTTATGGATGATGAGATTGATCAGCTTGGCAGAGAAGTCAGAGCAAATCACAACAAAGTGAGGAGCCTCTTGCTAAGTAACAATTTCGAGACATCTTGTGTAGATGCTTTCAGCCACAGGCTTCAGGATTTAGTCTAA 1647 0.4469 MATGLAILELLFKNSCFGTHPDPIQTRTHHPLPHQNSNSHPLGRNERGSRGIPYKTKEEDNERGSKGKWCAVRGREVLGLGGKEMLELGKEYYFIKDAAPLHIAMYPWFAMGHLTPFLHLANKLAKRGHKISFFIPRRTQAKLEDLNLHPNLITFVPINVPHVDGLPYDAETTSDVPSSLFPLIATAMDLTEKNIELLLLDLKPHIVLFDFSTYWLPNLARRIGIKSLQYWIISPATVGYMASPARQREDDMRKPPSGFPDCSIKLHAHEVRFLAAARKLEFGNGVLFYDRISVGADLSDAIGFKGCREIEGPYVDYLETQFGKPVLLTGPLVPEPSNSTLDAKWGEWLGRFKAGSVIYIAFGSEHSLQQNQLNELLLGLELTGMPFFAALKPPIEFESIEKALPKGFKERVQERGVVYGGWVQQQLILAHPSVGCFITHCGGASLTEALVNRCQLVLLPRLGSDFIINARTMGGKLRVGVEVEKGEEDGLFTKESVCKAVKTVMDDEIDQLGREVRANHNKVRSLLLSNNFETSCVDAFSHRLQDLV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01188 548 MobiDBLite consensus disorder prediction 50 65 - -
Gma12g01188 548 Gene3D Glycogen Phosphorylase B; 95 346 - -
Gma12g01188 548 MobiDBLite consensus disorder prediction 22 65 - -
Gma12g01188 548 PANTHER GLYCOSYLTRANSFERASE 97 546 - -
Gma12g01188 548 CDD GT1_Gtf-like 101 518 IPR002213 GO:0008194
Gma12g01188 548 MobiDBLite consensus disorder prediction 29 44 - -
Gma12g01188 548 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 421 508 IPR002213 GO:0008194
Gma12g01188 548 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 98 529 - -
Gma12g01188 548 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 97 546 - -
Gma12g01188 548 Gene3D Glycogen Phosphorylase B; 347 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01188 Gma-Chr12 15228350 15230936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01188 98 548 Glycosyltransferase AT5G54010 47.124 4.44e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01188 K22794 K12933 gmx:100820538 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02557 13 40442067 40443631 Gma12g01188 12 15228350 15230936 PCT