Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02551 ATGATTTCCTCAAGCAAAATCAAATCCGTCGATTTTTACAGAAAAATCCCTAGAGATTTAACTGAGGCATCATTATCCGGAGCAGGGCTATCCATAGTAGCAGCTCTCGCCATGATATTTTTATTTGGAATGGAGCTTAATAGTTATCTGTCTGTCACCACCTCTACACAAGTGATTGTTGACAAGAGTTCTGATGGGGACTATTTACGTATAGATTTTAATATCAGTTTTCCTGCCCTCTCCTGTGAGTTTGCAGCAGTTGATGTGAGTGATGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAAATTTAAGACCTACTGGTGCTGAATTCCATTCAGAACCAGCTGCTAACAGCATTAAGCATGATAATGAAGTAAATGAAGAATCTGTTGAAGGTTCTGTTGTACTCAAAACACAAAATTTTGATAAATATGCTCATCAGTTTCCAATTACAGTTGTTAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAAACCATCATGGGAGAAGGCAGCTAAAATTATTAAAGAGAGATATGATCCGGAAATGGATGGTCGTATTATTTTGGGGAGGGTAGATTGCACTGAAGATGGAGACTTGTGCCGGAGCCATCACATACAAGGGTATCCTTCAATTCGTATCTTTCGTAAAGGAAGTGATGTTAGAAGTAACCATGGACATCATGATCATGAGTCCTATTATGGAGATCGTGACACAGATAGCCTAGTCAAGACAATGGAGAATTTAGTTGCATCTCTCCCTTCAGAATCTCAGAAGTTACCTTTGGAGGATAAATCCGATGTTGCGAAAAATACAGAAAGACCAGCACCATCAACAGGAGGGTGTAGAATTGACGGATATGTGCGTGTCAAGAAGGTTCCTGGAAACTTGATCTTCTCAGCTAGATCCAATGCTCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCATTTATCTTTTGGAAGGAAAGTATCACCTAGGGTCATGAGTGATGTGAAGCGCTTGATACCTTACGTTGGTAGCAGCCATGACAGGCTGAATGGTCGATCATTTATCAATACACATGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAGGTGATAACTAGAAAGGATTATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTGGCACAGAGTTTACACATTCCTGTTGCTAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACGGAAAACCAGAAGTCCTTTTCTCACTTTATCACAAATGTCTGTGCTATTGTTGGAGGCATTTTCACGGTTGCTGGAATTATGGACGCGATTTTGCACAACACTATAAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1443 0.3964 MISSSKIKSVDFYRKIPRDLTEASLSGAGLSIVAALAMIFLFGMELNSYLSVTTSTQVIVDKSSDGDYLRIDFNISFPALSCEFAAVDVSDVLGTNRLNLTKTVRKFSIDSNLRPTGAEFHSEPAANSIKHDNEVNEESVEGSVVLKTQNFDKYAHQFPITVVNFYAPWCYWSQRLKPSWEKAAKIIKERYDPEMDGRIILGRVDCTEDGDLCRSHHIQGYPSIRIFRKGSDVRSNHGHHDHESYYGDRDTDSLVKTMENLVASLPSESQKLPLEDKSDVAKNTERPAPSTGGCRIDGYVRVKKVPGNLIFSARSNAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGRSFINTHDLGANVTMEHYLQIVKTEVITRKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIVGGIFTVAGIMDAILHNTIRLMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02551 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Gma13g02551 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Gma13g02551 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Gma13g02551 480 Gene3D Glutaredoxin 126 288 - -
Gma13g02551 480 Pfam Thioredoxin 144 243 IPR013766 -
Gma13g02551 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Gma13g02551 480 MobiDBLite consensus disorder prediction 266 292 - -
Gma13g02551 480 ProSiteProfiles Thioredoxin domain profile. 124 263 IPR013766 -
Gma13g02551 480 CDD PDI_a_family 144 258 - -
Gma13g02551 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02551 Gma-Chr13 40394488 40401861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02551 - - gmx:100806869 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02551 13 40394488 40401861 Gma13g02551 13 40394488 40401861 ECH
Gma13g02551 13 40394488 40401861 Gma12g02008 12 40683540 40689942 GST