Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02008 ATGGGTTTACCTGTTTCTTCCGTCTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCTGGAGCAGGGCTATCCATAGTAGCAGCTCTCGCCATGATATTTTTATTTGGAATGGAGCTTAACAGTTATCTGTCTGTCAGCACCTCTACACAAGTGATTGTTGACAAGAGTTCTGATGGGGACTACTTACGTATAGATTTCAATATCAGTTTTCCTGCCCTCTCCTGTGAGTTTGCAGCAGTTGATGTGAGTGATGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTTCTATTGATTCAAATTTAAGACCTACTGGTGCTGAATTCCATTCAGAACCAGCTGCTAACAGCATTAAGCATGATAATGAAGTAAATGAAGAATCTGTTGAAGGTTCTGTTGTACTCACAACACAAAATTTTGATAAATATGCTCATCAGTTTCTGATTACAGTTGTTAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAAACCATCATGGGAGAAGACAGCTAAAATTATTAAAGAGAGATATGATCCAGAAATGGATGGTCGTATTATTTTGGGGAGGGTAGATTGCACTGAAGACGGAGACTTGTGCCGGAGCCATCATATACAAGGGTATCCTTCAATTCGTATCTTTCGTAAAGGAAGTGACGTTAGAAGTGACCATGGACATCATGATCATGAGTCCTATTATGGAGATCGTGACACAGATAGCCTAGTCAAGACAATGGAGAATTTAGTGGCATCTCTCCCTTCAGAATCTCAGAAGTTACCTTTGGAAGATAAATCCAATGTTGCGACAAATACAAAAAGACCAGCACCATCAACAGGGGGATGTAGAATTGATGGATATGTGCGTGTCAAGAAGGTTCCTGGAAACTTGATCATCTCAGCTAGATCCAATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCATTTATCTTTTGGAAGGAAAGTATCACTTAGGGTCATGAGTGATGTGAAGCGCTTGATACCTTACGTTGGTAGCAGCCATGACAGGCTGAATGGTCGATCATTTATCAATACACATGATTTAGGAGCAAATGTTACTATTGAGCATTACCTTCAGATAGTTAAAACAGAGGTGATAACTAGAAAGGAATATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTGGCACAGAGTTTACACATTCCCGTTGCTAAGTTTCATCTTGAGCTCTCCCCCATGCAGCAGGTCTTAATAACGGAAAACCAGAAGTCCTTTTCTCACTTTATCACAAATGTCTGTGCTATTATTGGTGGCATTTTCACGGTTGCTGGAATTATGGACGCGATTTTTCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1434 0.3982 MGLPVSSVYRKIPRDLTEASLSGAGLSIVAALAMIFLFGMELNSYLSVSTSTQVIVDKSSDGDYLRIDFNISFPALSCEFAAVDVSDVLGTNRLNLTKTVRKFSIDSNLRPTGAEFHSEPAANSIKHDNEVNEESVEGSVVLTTQNFDKYAHQFLITVVNFYAPWCYWSQRLKPSWEKTAKIIKERYDPEMDGRIILGRVDCTEDGDLCRSHHIQGYPSIRIFRKGSDVRSDHGHHDHESYYGDRDTDSLVKTMENLVASLPSESQKLPLEDKSNVATNTKRPAPSTGGCRIDGYVRVKKVPGNLIISARSNAHSFDASQMNMSHVINHLSFGRKVSLRVMSDVKRLIPYVGSSHDRLNGRSFINTHDLGANVTIEHYLQIVKTEVITRKEYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQQVLITENQKSFSHFITNVCAIIGGIFTVAGIMDAIFHNTIRLMKKVELGKNF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02008 477 ProSiteProfiles Thioredoxin domain profile. 120 259 IPR013766 -
Gma12g02008 477 Pfam Thioredoxin 140 238 IPR013766 -
Gma12g02008 477 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 8 477 IPR045888 -
Gma12g02008 477 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 8 477 - -
Gma12g02008 477 SUPERFAMILY Thioredoxin-like 139 257 IPR036249 -
Gma12g02008 477 Gene3D Glutaredoxin 122 284 - -
Gma12g02008 477 Pfam Endoplasmic reticulum vesicle transporter 283 458 IPR012936 -
Gma12g02008 477 CDD PDI_a_family 140 254 - -
Gma12g02008 477 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 93 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02008 Gma-Chr12 40683540 40689942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02008 - - gmx:100809522 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02008 12 40683540 40689942 Gma12g02008 12 40683540 40689942 ECH
Gma13g02551 13 40394488 40401861 Gma12g02008 12 40683540 40689942 GST