Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02545 ATGGCTTATGAACCACCATTCCTCGAGACCTACAAGACCCTTGTGCAACAACACTTAGGGGATTCAAGGAATGAGTTCATAGTAGAGAGATGTGATATACCTTTGATCGACCTTGGCCGGTTAAGTCTTGAGAGAGAAGAATGCATGAGGGAAATTGCAGAAGCTGCAAGAGAATGGGGTTTCTTTCAAGTTGTTAATCATGGAATTTCACATGAGCTTCTGAAGAGCCTGCAAATTGAGCAAAAGAAAGTGTTCTATCAACCCTTTCTGAACAAGTCATCAACACAAGGCAAAGCTTACAGGTGGGGGAATCCATTTGCTACCAATCTGAGACAGCTGTCATGGTCAGAAGCCTTTCATTTCTATCTGACAGACATCTCAAGGATGGACCAGCATGAAACTCTGAGATCAAGCCTTGAAGTTTTTGCAATAACAATGTTTTCCCTTGCCCAAAGCTTGGCGGAAATACTAGTTTGCAAATTGAATACGAAATCCAACTATTTCCGAGAGCATTGCTTGCCAAAAAGTTCTTTCATTCGACTGAATAGATACCCTCAATGCCCCATATCATCAAAGGTGCATGGCTTGTTGCCTCACAGTGACACTAGTTTTCTTACCATTGTACATCAAGACCAGGTTGGGGGATTGCAATTGCTGAAAGATGGAAAATGGGTTGGTGTCAAGCCTAATCCACATGCCCTGGTGGTTAATATTGGTGACTTATTTCAGGCATTGAGTAATGGTGTTTATAAAAGCATAAAACACAGAGTGGTTGCTGCTGAGAAAGTAGAGAGGTTTTCTATGGCATTTTTCTATTCCCCCTCTGAGGAGGCAATTATACAAAGCCAAATCAAGCCACCTATCTACAGAAAATTCACTTTGAGGGAGTATAGACAACAAACAGAGAAAGATGTCAAGCAAACCGGGGATAAAGTGGGGCTCTCTAGATTTCTTCTGTAG 960 0.4188 MAYEPPFLETYKTLVQQHLGDSRNEFIVERCDIPLIDLGRLSLEREECMREIAEAAREWGFFQVVNHGISHELLKSLQIEQKKVFYQPFLNKSSTQGKAYRWGNPFATNLRQLSWSEAFHFYLTDISRMDQHETLRSSLEVFAITMFSLAQSLAEILVCKLNTKSNYFREHCLPKSSFIRLNRYPQCPISSKVHGLLPHSDTSFLTIVHQDQVGGLQLLKDGKWVGVKPNPHALVVNIGDLFQALSNGVYKSIKHRVVAAEKVERFSMAFFYSPSEEAIIQSQIKPPIYRKFTLREYRQQTEKDVKQTGDKVGLSRFLL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02545 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 313 - -
Gma13g02545 319 Pfam 2OG-Fe(II) oxygenase superfamily 179 274 IPR044861 -
Gma13g02545 319 Gene3D - 8 299 IPR027443 -
Gma13g02545 319 Coils Coil 38 58 - -
Gma13g02545 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 175 274 IPR005123 -
Gma13g02545 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 33 124 IPR026992 -
Gma13g02545 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 313 - -
Gma13g02545 319 SUPERFAMILY Clavaminate synthase-like 28 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02545 Gma-Chr13 40324225 40327035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02545 28 299 Glycosyltransferase AT5G59530 32.323 1.31e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02545 - K04125 gmx:100786176 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02014 12 40745095 40749980 Gma13g02545 13 40324225 40327035 ECH
Gma13g02545 13 40324225 40327035 Gma13g02545 13 40324225 40327035 ECH
Gma13g02545 13 40324225 40327035 Gma12g02014 12 40745095 40749980 GST