Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02014 ATGGCTCATGAACCACCATTCCTCGAGACCTACAAGACCCTTGTGCAAAAACACCAAGGGGATTCAAGGAATGGGTACTCCTCCTGCTCTATAGTGGAGAGATGTGATATACCTTTGATCGACCTTAGCCGGTTAAGTCTTGAGAGAGAAGAATGCATGAGAGAAATTGCAGAAGCTGCAAGAGAATGGGGTTTCTTTCAAGTTGTTAATCATGGAATTTCACATGAGCTTCTGAAGAGCCTGCAAATTGAGCAAAAGAAAGTGTTCTATCAACCATTTGTGAACAAGTCATCAACACAAGCCAAAGCTTACAGGTGGGGGAATCGATTTGCTACCGATCTGAGACAACTGTCATGGTCAGAAGCCTTTCATTTCTATCTGACAGACATCTCAAGGATGGACAAACATGAAACTCTGAGATCAAGTCTTGAAGCTTTTGCAATAAGAATGTTCTCCGTTGCCCAAAGCTTGGCGGAAATACTGGTGTGCAGATTGAATACGAAATCCAACTATTTCCGAGAACATTGCTTGCCAGAAAGTTCTTTCATTCGACTGAATAGATACCCTCCATGCCCTATATCGTCAAAGGTGCATGGCTTGTTGCCTCACAGTGACACTAGTTTTCTTACCATCGTGCATCAAGACCAGGTTGGGGGATTGCAATTGCTGAAAGATGGAAAATGGGTTGGTGTCAAGCCTAATCCACATGCTCTGGTCGTTAATATTGGTGACTTATTTCAGGCATTGAGCAATGGTGTTTATAAAAGCATAAAACACCGAGTGGTTGCTGCTGAGAAAGTAGAGAGGTTTTCTATGGCATTTTTCTATTGCCCCTCTGAGGAGGCAGTTATAAAAAGTAAAATCAAGCCACTTATGTACAGAAAATTCACTTTGATGGAGTATAGACAACAAACTGAGAAAGATGTCAAGCAAACCGGGGATAAAGTGGGGCTCTCTAGATTTCTTCTGTAG 972 0.4228 MAHEPPFLETYKTLVQKHQGDSRNGYSSCSIVERCDIPLIDLSRLSLEREECMREIAEAAREWGFFQVVNHGISHELLKSLQIEQKKVFYQPFVNKSSTQAKAYRWGNRFATDLRQLSWSEAFHFYLTDISRMDKHETLRSSLEAFAIRMFSVAQSLAEILVCRLNTKSNYFREHCLPESSFIRLNRYPPCPISSKVHGLLPHSDTSFLTIVHQDQVGGLQLLKDGKWVGVKPNPHALVVNIGDLFQALSNGVYKSIKHRVVAAEKVERFSMAFFYCPSEEAVIKSKIKPLMYRKFTLMEYRQQTEKDVKQTGDKVGLSRFLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02014 323 SUPERFAMILY Clavaminate synthase-like 31 306 - -
Gma12g02014 323 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 317 - -
Gma12g02014 323 Pfam 2OG-Fe(II) oxygenase superfamily 183 278 IPR044861 -
Gma12g02014 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 128 IPR026992 -
Gma12g02014 323 Gene3D - 35 319 IPR027443 -
Gma12g02014 323 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 317 - -
Gma12g02014 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 179 278 IPR005123 -
Gma12g02014 323 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02014 Gma-Chr12 40745095 40749980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02014 32 303 Glycosyltransferase AT5G59530 31.864 4.70e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02014 - K04125 gmx:106795437 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02014 12 40745095 40749980 Gma13g02545 13 40324225 40327035 ECH
Gma12g02014 12 40745095 40749980 Gma12g02014 12 40745095 40749980 ECH
Gma13g02545 13 40324225 40327035 Gma12g02014 12 40745095 40749980 GST