Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02531 ATGGCTCCTCTCACAAACTTGCATGGAGCAGTCTCCAAGACCTTAATTCCGATCACATGTCACCTTCCAAATGCACACAAAAGCATAACAAAGAGAGGACAAGTGATTGGATTTCTTGGAAGCAAAACACACCAAAAGGATGCATCAGAGTGTGCAGTTCAGGCCACAAGAAGAGCAGCAGCATTAGGCCTTGCCACTGTAGTGCTTACTTGGAAATTCAATGACAAGATTTCATTGGCTAAAGATAATGGTTTCTGGTATGAAGATCACCCTCTTCCTGGACCAACTGTCACTAACAATATTGCAAATGCGAAAACGGGGACACGTTCTTTTCTTAAGAGGGGGATTTACATAGCAAACATTGGAGTGAAAGGAAGTGTGTTTAGGATAAAGAAATATGCCTTTGATCTTCTGGCAATGGCGGATTTGATAGCAGAAGACACACTCAACTATGTGAGGAAGTACCTAAGGCTCAAGTCCACCTTCATGTACTATGATTTTGACAAGATTATCCCTGCCATTCCAGTGGATGATAAGCAGCAACTAACTGATATGGCTAACAAATTGTTTGATAATTTTGAAAGGCTTGAAGAAGCTTCAAGGAAGAAAAGTCTACCTGAAACAAAATCATGCTATCAGGAAACTGAAGTTATGCTTAAAGAGGTCATGGACCGGATGGATATAATGTACAAAACAATTTGA 702 0.4046 MAPLTNLHGAVSKTLIPITCHLPNAHKSITKRGQVIGFLGSKTHQKDASECAVQATRRAAALGLATVVLTWKFNDKISLAKDNGFWYEDHPLPGPTVTNNIANAKTGTRSFLKRGIYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKIIPAIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVMDRMDIMYKTI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02531 233 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 1 226 - -
Gma13g02531 233 SUPERFAMILY Oxygen-evolving enhancer protein 3, 117 226 IPR023222 -
Gma13g02531 233 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 226 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma13g02531 233 Gene3D - 89 227 IPR023222 -
Gma13g02531 233 Coils Coil 179 199 - -
Gma13g02531 233 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 44 226 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02531 Gma-Chr13 40198153 40199769 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02531 K08901 - gmx:100783530 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02531 13 40198153 40199769 Gma13g02531 13 40198153 40199769 ECH
Gma13g02531 13 40198153 40199769 Gma12g02026 12 40904957 40906786 GST