Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02026 ATGAACCATCTTTCATTCTCAGACCTCACACATATGAGTTCCTTCACCACCATCATGGCTCCTGTGACAAACTTGCATGGAGCAGTCTCCAAAACCTTAATTCCCATCACATGCCACCTTCCAAATGCACACAAAAGCATAACAAAGAGAGGACAAGTGATTGGATTTCTTGGAAGCAAAGCACAAAAGGAAGCATCAGAGTGTCAAGTTCAGGCCACAAGAAGAGCAGCAGCATTAGGCCTTGCCACTGTAGTGCTTACTTGGCAATTCAATGACAAGGTTTCATTGGCTAAAGATAATGGTTTCTGGTATGAGGATCATCCTCTCCCTGGACCAACTGTCACTAACAATATTGCAAATGAGAAAACGGGAACACGTTCTTTTCTTAAGAGGGGGCTTTACATAGCAAACATTGGAGTGAAAGGAAGTGTGTTTAGGATAAAGAAATATGCCTTTGATCTTCTGGCAATGGCGGATTTGATAGCAGAAGACACACTCAACTATGTGAGGAAGTACCTAAGACTCAAGTCCACATTCATGTACTATGATTTTGACAAGGTTATCTCTGCCATTCCAGTGGATGATAAGCAGCAACTAACTGATATGGCTAACAAATTGTTTGATAATTTTGAAAGGCTTGAAGAAGCTTCAAGGAAGAAAAGTCTACCTGAAACAAAATCATGCTATCAGGAAACTGAAGTTATGCTTAAAGAGGTCATGGACAAGATGGATATAATGTACAAATCAATTTGA 753 0.4024 MNHLSFSDLTHMSSFTTIMAPVTNLHGAVSKTLIPITCHLPNAHKSITKRGQVIGFLGSKAQKEASECQVQATRRAAALGLATVVLTWQFNDKVSLAKDNGFWYEDHPLPGPTVTNNIANEKTGTRSFLKRGLYIANIGVKGSVFRIKKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKVISAIPVDDKQQLTDMANKLFDNFERLEEASRKKSLPETKSCYQETEVMLKEVMDKMDIMYKSI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02026 250 Coils Coil 196 216 - -
Gma12g02026 250 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 19 243 - -
Gma12g02026 250 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 58 243 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma12g02026 250 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 19 243 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma12g02026 250 SUPERFAMILY Oxygen-evolving enhancer protein 3, 134 243 IPR023222 -
Gma12g02026 250 Gene3D - 106 244 IPR023222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02026 Gma-Chr12 40904957 40906786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02026 K08901 - gmx:100814163 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02026 12 40904957 40906786 Gma12g02026 12 40904957 40906786 ECH
Gma13g02531 13 40198153 40199769 Gma12g02026 12 40904957 40906786 GST