Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02519 ATGTCCCTTCCAGCTTCAACACTTGCCTCAATTCAACATGCAGTATCTGACCAGCTCAAGCGACCTTGCGTGAGTTTTGCTCCTTGCATATGGGGAGATACTTTCCTTGAATATGCTTCTCAATTTGAGGGAGTCAATGATGACGAGAAGCAGCAAGCTCAAACACTAAGGAATGAGGTGCAAACGATGTTTCAATCATCAATCGATCAAAATATCATACAAAAATTAAACTTGATTGACTCAGTCCAACGTTTCGGTGTATCCTATCATTTCCAACAAGAAATCAATCAAGCATTGGAACAAATTCACAACAGTTTCACAAAAAATAACACCATCAGTGATGATGGCAATCATCACTCTCTTGCTCTACTCTTTCGTTTGCTTAGACAGCAAGGATATCAAATTTCATCAAGTGCATTTAACAAATTCAAAAATGATCAAGGAAACTTTAGTGAAACACTTGCTAATGATATTCAAGGGTTGTGTAGCTTGTATGAAGCTGCACATCTAAGAACTCCCGAAGATGACATATTGGAGGAAGCATGTGACTTCTCAAATACTCACATGAAGTCCTTGGCCAACCAATTAAGCCCATCTCTTGCAGCACAAATCAATCACTGCTTAAGACTACCTCTTAACAAGAGTTTAATTAGGTTCGAGGCAAGGTGTCACATGAATCTCTATGAAAAAGATGCATCTCATAACAAAACTCTACTAACCTTTGCAAAAGTAGATTTCAATATTCTTCAAAAACTACATCAAAAAGAAATTAGCACTATCACCAAGTGGTGGAAAAAGTCAAACTTTGAGACTAAGGTCCCTTACGCTAGAGGTAGGTTGGTTGAGGCCTACCTTTGGTCATTGGCTATGTCCTACAAACCTGAACACAGCCTCGCAAGAATGTTTGTGGGAAAATTGATTGCTGTTGTTTGTCTTCTAGACGATACTTATGATGCTTATGGCACTATTCAAGAACTTGAGCTATTCACAGAAGCAATTCAAAGATGGAATAAGAGTCCCATTGAATCTCTTCCACAATGCATGAAAGTAGTATTTGATACAGTTGTAGAACTGGGTGAAGAAATAGAATTGGCGACAACGGAGAGTGGGAAATCAAGCTTTGTAGTGCAATATTTTAAACAAGCTGTTTTTAACTTAATAAAAGGCTACATGGCTGAGGCAAAATGGTGTCACGAGGGTTACATTCCAACATATGATGAATATAAAGTTAATGGAATTTTGACTTCTTGTTTCCCTCTTTTCATTACATCATTTATTGGCTTGGGAGAATTTGCAAACAAAGATGTGTTTGATTGGATTTTTAGTGATCCAAATATCATTAAAGTGGTATCAATTATTGGTAGAGTATTGGACGACATGGGCTCACATAAGTTTGAGCAACAAAGAGTACATGTTGCCTCAGCTGTGGAATGTTGCATGAAGCAATATAACATTTCACAAGCAGAGGCGTACCACCTTATCCATAATGACGTTGAAGATGGTTGGAAGGTTATAAATGAAGAGTGCCTTAAGTCAAATGACATCCCAAAATCTGTGCTTGATTGTGTAGTTAATTTGGCACGCATGTCTATGGTTTCATATGAAAACCACCAGGATAAATTCACTAATGGAGAACTACTGAAAGGTTATGTGTCTTCATTGCTTATGGATCCCATGTGCCTTGAACTACACCAGTAG 1698 0.3793 MSLPASTLASIQHAVSDQLKRPCVSFAPCIWGDTFLEYASQFEGVNDDEKQQAQTLRNEVQTMFQSSIDQNIIQKLNLIDSVQRFGVSYHFQQEINQALEQIHNSFTKNNTISDDGNHHSLALLFRLLRQQGYQISSSAFNKFKNDQGNFSETLANDIQGLCSLYEAAHLRTPEDDILEEACDFSNTHMKSLANQLSPSLAAQINHCLRLPLNKSLIRFEARCHMNLYEKDASHNKTLLTFAKVDFNILQKLHQKEISTITKWWKKSNFETKVPYARGRLVEAYLWSLAMSYKPEHSLARMFVGKLIAVVCLLDDTYDAYGTIQELELFTEAIQRWNKSPIESLPQCMKVVFDTVVELGEEIELATTESGKSSFVVQYFKQAVFNLIKGYMAEAKWCHEGYIPTYDEYKVNGILTSCFPLFITSFIGLGEFANKDVFDWIFSDPNIIKVVSIIGRVLDDMGSHKFEQQRVHVASAVECCMKQYNISQAEAYHLIHNDVEDGWKVINEECLKSNDIPKSVLDCVVNLARMSMVSYENHQDKFTNGELLKGYVSSLLMDPMCLELHQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02519 565 Pfam Terpene synthase family, metal binding domain 239 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gma13g02519 565 SFLD Isoprenoid Synthase Type I 234 559 - -
Gma13g02519 565 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 560 - -
Gma13g02519 565 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 28 234 IPR008930 -
Gma13g02519 565 Coils Coil 39 59 - -
Gma13g02519 565 Gene3D - 70 234 IPR036965 GO:0010333|GO:0016829
Gma13g02519 565 SUPERFAMILY Terpenoid synthases 234 559 IPR008949 -
Gma13g02519 565 PANTHER OS04G0344100 PROTEIN-RELATED 2 560 - -
Gma13g02519 565 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 559 IPR034741 -
Gma13g02519 565 Pfam Terpene synthase, N-terminal domain 30 208 IPR001906 GO:0010333|GO:0016829
Gma13g02519 565 CDD Terpene_cyclase_plant_C1 21 558 IPR044814 GO:0010333|GO:0016102
Gma13g02519 565 Gene3D Farnesyl Diphosphate Synthase 28 544 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02519 Gma-Chr13 40101590 40104423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02519 K15803 - gmx:100781367 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02519 13 40101590 40104423 Gma13g02519 13 40101590 40104423 ECH
Gma13g02519 13 40101590 40104423 Gma12g02039 12 41001049 41005498 GST