Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02039 ATGTCCCTTCCAGCTTCAACACTTGCTTCAACTCAACATGCAGTATTTGACATCAAGCGACCTATTACAAGATATGCTCCTAGCATGTGGGGAGATACTTTCCTTCAATATGCTTCTGAATCTAAGGAAGTCAGTGAAAATGTGAAGCAACAAGCTGATATACTAAAAGAGGAGGTGAAAATGATGTTTCAATCGTCAAATCAAAATATCATGCAAAAATTAAACTTCATTGACTCAATCCAACGTTTCGGGATATCCTATCATTTCCAAGAAGAGATTAACGAAACATTGGAACAAATTCACAACACTTTTACCAAAAATAACACCATTATCATCAGTGAAGATAGCAATCATCACTTTCTCGCTCTACTCTTTCGTTTGCTCAGGCAACAAGGATATCAAATTTCATCAAATGTATTTAACAAATTCAAAAATGATCAAGGAAAGTTCAATGAAACACTTGCCAATGATATTCAAGGGTTGTGCAGTTTGTATGAAGCTGCACATTTAAGAACTCACAAAGATGCTATACTAGAAGAAGCATGTGACTTTGCAAATACTCAACTTAAGTCCTTGGCGGACAAACTGAGCCCATCTATTGCTACACAAATCAATCATTGCTTAAGACAACCTTTTAACAAGAGTTTACCTAAGTTCGAGGCAAGGTATCACATGACTCTCTATGAAGAAGATCCTTCTCATAACAAAACTCTGCTAACCTTTGCGAGAGTAGATTTAAATATTCTTCAAAAAATGCATCAAAAAGAGATTGGCATTATAACCAAGTGGTGGAAAAAATTAAATATTGTGAAAAAGGTGCCTTATGCTAGAGATAGGTTAGTTGAGGGCTATCTTTGGGCATTAGCATTTTCCAGCCAGCCTGAATACAACAAAGCAAGAATGTTTGTTGGAAAATTGATGGCTCTTGCCGCTATTCTAGATGATACTTACGATGCTTATGGCACTATTCAAGAACTTGAACTCTTCACAGAAGCAATTCAAAGATGGGATATTAGTCCCATTGAATCCCTTCCACAATGCATGAAAGTAGTTTTCGAAACAATTCTAGAGCTGTGTGAAGAAATAAAGTTGGAGACATCTGAGAGTGGAAAATCAAGCTTTGTGGTTCCGCGTTTTACACAAGCTATTTGTGAATTAGTAAAAGGTTACATGGTTGAAGCAAAATGGTGCCAAGAGGGTTTCGTTCCAACATATGATGAGTATAAAGTTAATGGCATCTTAACTGCTGCTTTCATTCCTTTAATGATATCCTTAATTGGACTCGGAGAATTTACAACAAAGGATGTGTTTGATTGGTTTTTCAATGATCTAAAGATCGTTGAAGCTGTATCAATTATTGGCAGGCTCTTGAATGACACATCATCGCATAAGTTTGAGCAGCAACGAGTTCATGTTGCCTCAGCTGTGGAATGTTGCATGAAGCAATACAATATTTCGCAATCAGAGGCTTATAACTTCATTCGCAAGGACGTTGAAGATTATTGGAAGGTTATAAATGAAGAGTGCCTCAAATTAAATGATATCCCAAAGTCTGTGCTTGAAATTGTAGTTAATTATGCACGTGTAGCAGAAGTTACATATGAAAATCATCAGGATAAATTCACAAATGCGGATTTACTGAAGGATTACATCTCTTCACTGCTTTTGGATCCCGTGCGCATCAATGAACATTAA 1695 0.3652 MSLPASTLASTQHAVFDIKRPITRYAPSMWGDTFLQYASESKEVSENVKQQADILKEEVKMMFQSSNQNIMQKLNFIDSIQRFGISYHFQEEINETLEQIHNTFTKNNTIIISEDSNHHFLALLFRLLRQQGYQISSNVFNKFKNDQGKFNETLANDIQGLCSLYEAAHLRTHKDAILEEACDFANTQLKSLADKLSPSIATQINHCLRQPFNKSLPKFEARYHMTLYEEDPSHNKTLLTFARVDLNILQKMHQKEIGIITKWWKKLNIVKKVPYARDRLVEGYLWALAFSSQPEYNKARMFVGKLMALAAILDDTYDAYGTIQELELFTEAIQRWDISPIESLPQCMKVVFETILELCEEIKLETSESGKSSFVVPRFTQAICELVKGYMVEAKWCQEGFVPTYDEYKVNGILTAAFIPLMISLIGLGEFTTKDVFDWFFNDLKIVEAVSIIGRLLNDTSSHKFEQQRVHVASAVECCMKQYNISQSEAYNFIRKDVEDYWKVINEECLKLNDIPKSVLEIVVNYARVAEVTYENHQDKFTNADLLKDYISSLLLDPVRINEH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02039 564 PANTHER OS04G0344100 PROTEIN-RELATED 2 559 - -
Gma12g02039 564 Pfam Terpene synthase, N-terminal domain 29 208 IPR001906 GO:0010333|GO:0016829
Gma12g02039 564 CDD Terpene_cyclase_plant_C1 20 558 IPR044814 GO:0010333|GO:0016102
Gma12g02039 564 SFLD Isoprenoid Synthase Type I 234 560 - -
Gma12g02039 564 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 234 IPR008930 -
Gma12g02039 564 Gene3D - 68 234 IPR036965 GO:0010333|GO:0016829
Gma12g02039 564 Coils Coil 38 58 - -
Gma12g02039 564 Pfam Terpene synthase family, metal binding domain 239 503 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gma12g02039 564 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 559 - -
Gma12g02039 564 Gene3D Farnesyl Diphosphate Synthase 27 545 IPR008949 -
Gma12g02039 564 SUPERFAMILY Terpenoid synthases 234 560 IPR008949 -
Gma12g02039 564 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 560 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02039 Gma-Chr12 41001049 41005498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02039 K15803 - gmx:100794444 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02039 12 41001049 41005498 Gma12g02039 12 41001049 41005498 ECH
Gma13g02519 13 40101590 40104423 Gma12g02039 12 41001049 41005498 GST