Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02508 ATGGCTGCACAAGAAAACAACTTCCAAGACTACTTGCCTGTGATGGCCAACAAGCTTGGTGGGGATGGCCTAATTGATGAACTGTGCAATGGGTTCGATCTTTTGAAGGATTCTGATAAAGGGGTCATCACTTTTGAGAGCCTCAAGAGGAATTCTTACTTGCTTGGTCTTCAGGGTCTCAGTGATGAGGATCTTCGCTCCATGGTTTTGGAAGGTGACTTTGATGGTGACGGTGCACTCAACCAGATGGAGTTCTGTGTCTTGATGTTCAGACTCAGCCCTGAATTGATGGAGGGCTCAAAGATGTGGCTTGAACAAGTCCTTCAACAAGAGCTTAAAGATTATTTCTAA 351 0.4501 MAAQENNFQDYLPVMANKLGGDGLIDELCNGFDLLKDSDKGVITFESLKRNSYLLGLQGLSDEDLRSMVLEGDFDGDGALNQMEFCVLMFRLSPELMEGSKMWLEQVLQQELKDYF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02508 116 SUPERFAMILY EF-hand 7 89 IPR011992 -
Gma13g02508 116 PANTHER CALCIUM-BINDING PROTEIN KIC 4 115 IPR044205 GO:0005509
Gma13g02508 116 Pfam EF-hand domain pair 40 91 IPR002048 GO:0005509
Gma13g02508 116 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Gma13g02508 116 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Gma13g02508 116 PANTHER CALCIUM-BINDING PROTEIN KRP1 4 115 - -
Gma13g02508 116 Gene3D - 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02508 Gma-Chr13 39975098 39975793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02508 4 112 EF-hand Containing Proteins AT5G54490 66.364 6.13e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02508 K24345 - gmx:100306396 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02508 13 39975098 39975793 Gma13g02508 13 39975098 39975793 ECH
Gma13g02508 13 39975098 39975793 Gma12g02051 12 41159558 41160286 GST