Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02051 ATGGCTGCACAACGAAACTTCCAAGACTACTTGCCTGTGATGGCCAACAAGCTTGGTGGGGATGGCCTAATTGATGAACTGTGCAATGGGTTCAATCTGTTGAAGGATTCTGATAAAGGGGTCATCACCTTTGAGAGCCTCAAGAGGAACTCTGCCTTGTTTGGCCTTCAGGGTCTTAGTGATGAAGATCTTCGGTCCATGGTTTTGGAAGGTGACTTTGATGGTGATGGTGCACTCAATCAGTTGGAGTTCTGTGTTTTGATGTTCAGACTCAGCCCTGAATTGATGGAGGGCTCAAAGATGTGGCTTGAACAAGTCCTTCAACAAGAGCTTAAGGATTATTTCTAA 348 0.454 MAAQRNFQDYLPVMANKLGGDGLIDELCNGFNLLKDSDKGVITFESLKRNSALFGLQGLSDEDLRSMVLEGDFDGDGALNQLEFCVLMFRLSPELMEGSKMWLEQVLQQELKDYF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02051 115 Pfam EF-hand domain pair 39 90 IPR002048 GO:0005509
Gma12g02051 115 PANTHER CALCIUM-BINDING PROTEIN KRP1 3 114 - -
Gma12g02051 115 ProSitePatterns EF-hand calcium-binding domain. 72 84 IPR018247 -
Gma12g02051 115 Gene3D - 4 114 - -
Gma12g02051 115 PANTHER CALCIUM-BINDING PROTEIN KIC 3 114 IPR044205 GO:0005509
Gma12g02051 115 ProSiteProfiles EF-hand calcium-binding domain profile. 59 94 IPR002048 GO:0005509
Gma12g02051 115 SUPERFAMILY EF-hand 6 88 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02051 Gma-Chr12 41159558 41160286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02051 3 111 EF-hand Containing Proteins AT4G27280 64.545 8.02e-48 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02051 K24345 - gmx:100500465 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02051 12 41159558 41160286 Gma12g02051 12 41159558 41160286 ECH
Gma13g02508 13 39975098 39975793 Gma12g02051 12 41159558 41160286 GST