Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02502 ATGGACCTGGACTACCTCTTAGACTTCGAGGACTACTTCCCTTCCATGATTTCGCGCATGGGAGCAGAAGGGTTCATTGCTGAGCTCTGCAACGGGTTCCGCTTGCTCATGGACGTGAACAAGGGCCTCATCACATTCGAGAGCCTGAAGCTGAACTGCTACTTGCTCGGTCTCGACGTCAGGGACGACGAGCTCGCCTGCATGCTCATAGAGGGTGATTTGGACGGCGATGGTGCTCTAAGCCAAATGGAGTTCTGCATTCTCATGTTTAGGCTCAGCCCTTGCTTGATGGATGATGGACCTAACAAAATGTGCACTCCTCAGGGTGCTTGTGGTGGTGGTGGTGATCCTATGTTGATGATGAATGTAATGTAA 375 0.5147 MDLDYLLDFEDYFPSMISRMGAEGFIAELCNGFRLLMDVNKGLITFESLKLNCYLLGLDVRDDELACMLIEGDLDGDGALSQMEFCILMFRLSPCLMDDGPNKMCTPQGACGGGGDPMLMMNVM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02502 124 SUPERFAMILY EF-hand 4 89 IPR011992 -
Gma13g02502 124 PANTHER CALCIUM-BINDING PROTEIN KIC 5 106 IPR044205 GO:0005509
Gma13g02502 124 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Gma13g02502 124 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 5 106 - -
Gma13g02502 124 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Gma13g02502 124 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Gma13g02502 124 Gene3D - 7 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02502 Gma-Chr13 39919351 39920119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g02502 9 98 EF-hand Containing Proteins AT5G54490 59.783 1.11e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02502 K24345 - gmx:100794479 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02502 13 39919351 39920119 Gma13g02502 13 39919351 39920119 ECH
Gma13g02502 13 39919351 39920119 Gma12g02052 12 41188347 41188979 GST