Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02052 ATGGAGCAGGACTACCTCTTGGACTTTGAGGACTACTTCCCTTCGATGATTGCACGCATGGGAGCGGAAGGGTTCATTGGAGAGCTCTGCAACGGGTTCCGCTTGCTCATGGACGTGAATAAGGGCCTCATCACCTTCGAGAGCCTCAAGCTCAACTGCTACCTGCTCGGCCTCGACGTCATGGACGACGAGCTCGCCTGCATGCTCATGGAGGGCGATTTGGACGGCGATGGCGCTCTAAGCCAAATGGAGTTTTGCATTCTCATGTTTAGGCTCAGCTCTTGCTTGTGCACTCCTCACggtggtggtggtggtgatggtggtagtggtggtagtggtggGGATCCCATGTTGATGAATGTAATGTAA 369 0.4743 MEQDYLLDFEDYFPSMIARMGAEGFIGELCNGFRLLMDVNKGLITFESLKLNCYLLGLDVMDDELACMLMEGDLDGDGALSQMEFCILMFRLSSCLCTPHGGGGGDGGSGGSGGDPMLMNVM 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02052 122 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Gma12g02052 122 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Gma12g02052 122 PANTHER CALCIUM-BINDING PROTEIN KIC 3 97 IPR044205 GO:0005509
Gma12g02052 122 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 3 97 - -
Gma12g02052 122 Gene3D - 7 97 - -
Gma12g02052 122 SUPERFAMILY EF-hand 3 89 IPR011992 -
Gma12g02052 122 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02052 Gma-Chr12 41188347 41188979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g02052 2 94 EF-hand Containing Proteins AT4G27280 57.895 3.54e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02052 K24345 - gmx:100776185 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02052 12 41188347 41188979 Gma12g02052 12 41188347 41188979 ECH
Gma13g02502 13 39919351 39920119 Gma12g02052 12 41188347 41188979 GST