Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02500 ATGATAAGCAAGGTATTCCTAAAGCCCCATCTGGTTGGTCTTCTTCTTCCCTCTAAATTCGGCTTGGTCTTCCCTCACACAACCAAGCCTTCTTCTTCCCTTCCCACCACTTTCTTCATTTCACACTTCTCCTCTGCCCCTCTCTCTTCCTACGGACCCTCCCTCCACAAGGGAACAACAATCCCCTCCCAATCCCTAAACGACGCCGTTCTCTGCGAAGAAGCCTTCACGCGAGTCTTCCACCTCGCCGCACTCCGCGTCCCCTCCTCCGAATGCTCCGCCCTCGAGAGCCGCCTCCGTGGCCACCTCCTTAACTGGCCCCGCCTCCGCAATATCGCCCGCGTCCCCGGCGACGACATCGACCCCACCCTCGCCCCTCTCTTGCCTCAACCAGGTAACGGAGAATTCGACTTCGACGAAAATGAAGTAGAAGAAAGACGTCTCGTCTCGCTGCAACGCCGGATTCACGGCAAGGCGGACGGCGACGGCGACGTGTTGAGCCCCGTGCTGTACCGTGACAGGCTCGCGAGGACGTTCAACACCAGCGGCTTCGTGAAGTTCCGCCACCTCGCGAAGATTTCGCGGCCGAACAGGAATAAGAGGAGGAGGAAGAGGAAGGAGAAGGAGTCGAGTGAAGGGGTTAAGCGCGTGGGGGAGAATGGGTTTGCTGCAGTTGAGGTTATTGAGGAAGAAGAAGAAGGAGAAGAAAGTGGTGGTTTGAGGAATTTGCTTGGAGAAGAGTTTGCGAGGAAAAAATGGAGAGGTTCCACGAGGTTGCTGCTTCTGGATGAACGCTACGCCGATCGCGGTTTCGAGGAGTTGCCTGAGGCAACTAAGGCTGTTTTGAAGGAGTATGCAGAAAAGAGTACAAATTTGATGCTTGAGCTAGTTAGATGCAAGTTGACACTATTCTATGATTACTGGCAGATGAATGAGGTCTTGGAGACCTTGCTGCCTGAGGGTATGATTATTCCTTCCGCTTTTGAGACTGTTGGTCATATAGCACACCTGAATTTGAGAGACGAACATTTACCATACAAGTGGCTAATAGCTAAGGTTGTGCTGGATAAGAATAAGCCAAGGATACAAACGGTTGTGAACAAGATTGATACAATTCAAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGTATTCACTTTCAGGTTGACTTAGCGACAGTATATTGGAGTTCTAGGCTAGGAACTGAAAGACAAAGGCTTCTGAGTGGTTTTACACGGAACGATGTCGTCTGTGATGTTTTCTCTGGAGTTGGTCCTTTAGCCATATCTGCAGCAAGGATAGTTAAACGTGTTTTTGCTAATGACTTAAATCCTTATGCAGTTGAGTATCTGGAAAGAAATTGTGTTCTAAACAAACTTGACAGGAAGATTAAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAATCTATGTATGACAGTGATATATCTCAGTCCATCACACAGGTGGTTATGAACTTGCCAAGTGAAGCTGCAGAATTTCTAGATGCATTTCGGGGAATATACAAAAATAGACCCAAGGATGGGGAATATACTTTGCCATTGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAGAATTTGATTTTCACGAGAGAATAAGAATTGCACTGCTAGAAGTTGCAGTCAATGTAGACATGAGACGGGTAAGGCTTGTTGCTCCTGGAAAATGGATGTTGTGCGCATCGTTCCTTCTCCCTAAAAGTGTAGCATTTGCTGATACTGCAGTTGATACCTAA 1806 0.4773 MISKVFLKPHLVGLLLPSKFGLVFPHTTKPSSSLPTTFFISHFSSAPLSSYGPSLHKGTTIPSQSLNDAVLCEEAFTRVFHLAALRVPSSECSALESRLRGHLLNWPRLRNIARVPGDDIDPTLAPLLPQPGNGEFDFDENEVEERRLVSLQRRIHGKADGDGDVLSPVLYRDRLARTFNTSGFVKFRHLAKISRPNRNKRRRKRKEKESSEGVKRVGENGFAAVEVIEEEEEGEESGGLRNLLGEEFARKKWRGSTRLLLLDERYADRGFEELPEATKAVLKEYAEKSTNLMLELVRCKLTLFYDYWQMNEVLETLLPEGMIIPSAFETVGHIAHLNLRDEHLPYKWLIAKVVLDKNKPRIQTVVNKIDTIQNEYRTMQLEVLAGNHSLVTTVVENGIHFQVDLATVYWSSRLGTERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAVEYLERNCVLNKLDRKIKVFNMDGRRFIKSMYDSDISQSITQVVMNLPSEAAEFLDAFRGIYKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWMLCASFLLPKSVAFADTAVDT 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02500 601 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 68 590 IPR025792 GO:0009019|GO:0030488
Gma13g02500 601 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 41 599 - -
Gma13g02500 601 CDD AdoMet_MTases 431 490 - -
Gma13g02500 601 Gene3D - 309 387 - -
Gma13g02500 601 MobiDBLite consensus disorder prediction 196 215 - -
Gma13g02500 601 Gene3D Vaccinia Virus protein VP39 391 588 IPR029063 -
Gma13g02500 601 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 328 590 IPR030382 -
Gma13g02500 601 Pfam Met-10+ like-protein 327 526 IPR030382 -
Gma13g02500 601 PANTHER TRNA METHYLTRANSFERASE 41 599 - -
Gma13g02500 601 Coils Coil 362 382 - -
Gma13g02500 601 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 324 590 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02500 Gma-Chr13 39874076 39881555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02500 K15429 - gmx:100793959 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02500 13 39874076 39881555 Gma13g02500 13 39874076 39881555 ECH
Gma13g02500 13 39874076 39881555 Gma12g02054 12 41223123 41230419 GST