Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02054 ATGATAAGCAACGTATTCCTAAAGCCGCAAGTGGTTGGGCTTCTTCCCTCAAAATTGGTCTTCCCTCACAGAAGCAAAGCTTCTTCTTCCCTTTCCCTTCCCACACACTTCTCCACTGCCCCTCTCTCCTCCTACGGACCCTCTCTCCACAAGGGAACACCAATCCCTTCCCAAACCCTACCCCAAGACGACGCCGTCCTCTGCCAAGAAGCATTCACTCGAGTCTTCCACCTCGCCGCCCTCCGCCTCCCCTCCTCCCAATGCTCCGCCCTTGAAGGCCGCCTCCGCGGCCACCTCCTCAACTGGCCCCGCCTCCGCAACATCGCCCGCGTCCCCGGCGACGACCTCGACCCCTCCCTCGCCCCTCTCTTGCCTCAACCAGGTAACGCTAACGGAGATTTCGACTATGATGATGAAGAAGAAAGACGTCTCGTCTCGCTGCAACGCCGGATCCACGGCAAGGCGGACGGCGACGGCGACGTTCTGGGCCCCGTGCTGTACCGCGACCGGCTCGCCAGGACGTTCAACACCAGCGGCTTCGTGAAGTTCCGCCACCTCGCTAAGATTTCGCGGCCGAACAGGAATAAGAGGAGGAGGAAGAGTAGGGAGGCGAGTGAAGAGGTTAAGCCCGTGGGGGAGAACAGGTTTGCCGCGGTTGAGGTTGTTGAGGATGAAGAAGAAGGAAGTGATGGTTTGAGGAATTTGCTTGGCGAAGAGTTTGCGAGGAGCAAGTGGAGGGGTTCCACGAGGTTGCTGCTTCTGGATGAACGCTACGCGGGTCGCGGCATGGAGGAGTTGCCTGAGGCAATTAAGGCTGTTTTGAAGGAGTATGCAGAAAAGAGTACAAATTTGACGCTTGAGCTAGTTAGATGCAAGCTGACACTATTCTATGATTACTGGCAGATGACTGAGGTCTTGGAGGCCTTGCTGCCTGAGGGTATGATTATTCCTTCTGCTTTTGAGACTGTTGGTCATATAGCACACCTGAATTTGAGAGACGAACATTTACCATACAAGAGGCTAATAGCAAAGGTTGTGCTGGATAAGAATAAGCCAAGGATACAAACCGTTGTGAACAAGATTGATTCAATTCAAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCTGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGTCTTCGCTTTCAGGTTGACTTAGCGACAGTATATTGGAGTTCTAGGCTTGGAACTGAAAGACAAAGGCTTCTGAGTGGTTTTACACGGAACGATGTCGTCTGCGATGTTTTCTCTGGAGTTGGTCCTTTAGCCATATCTGCCGCAAGGATAGTTAAGCGTGTTTTTGCTAATGACTTAAACCCTTATGCAGTTGAGTATCTGGAAAGAAATTGTGTTCTAAACAAACTTGAGAGGAAGATAAAGGTCTTTAACATGGATGGAAGGAGGTTCATTAAAGCTATGTATGACAGTGATATTTCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAGTGAAGCTGCAGAATTTCTAGATGCATTTCGGGGAATATACAAAAATAGACCCAAGGATGGGGAATATACTTTGCCATTGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAGAATTTGATTTTCACGAGAGAATAAGAATTGCGCTGCTAGAAGTTGCGGTCAACGTAGACATGCGACGGGTACGACTTGTTGCTCCTGGAAAATGGATGTTGTGCGCATCGTTTATTCTCCCTAAAAGTGTAGCATTTGCTGATACTGCTGCAGTTGATACCTAA 1785 0.4947 MISNVFLKPQVVGLLPSKLVFPHRSKASSSLSLPTHFSTAPLSSYGPSLHKGTPIPSQTLPQDDAVLCQEAFTRVFHLAALRLPSSQCSALEGRLRGHLLNWPRLRNIARVPGDDLDPSLAPLLPQPGNANGDFDYDDEEERRLVSLQRRIHGKADGDGDVLGPVLYRDRLARTFNTSGFVKFRHLAKISRPNRNKRRRKSREASEEVKPVGENRFAAVEVVEDEEEGSDGLRNLLGEEFARSKWRGSTRLLLLDERYAGRGMEELPEAIKAVLKEYAEKSTNLTLELVRCKLTLFYDYWQMTEVLEALLPEGMIIPSAFETVGHIAHLNLRDEHLPYKRLIAKVVLDKNKPRIQTVVNKIDSIQNEYRTMQLEVLAGNHSLVTTVVENGLRFQVDLATVYWSSRLGTERQRLLSGFTRNDVVCDVFSGVGPLAISAARIVKRVFANDLNPYAVEYLERNCVLNKLERKIKVFNMDGRRFIKAMYDSDISQSITQVVMNLPSEAAEFLDAFRGIYKNRPKDGEYTLPLIHVYGFSKARDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWMLCASFILPKSVAFADTAAVDT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02054 594 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 27 591 - -
Gma12g02054 594 CDD AdoMet_MTases 423 482 - -
Gma12g02054 594 Gene3D - 301 379 - -
Gma12g02054 594 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 320 582 IPR030382 -
Gma12g02054 594 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 64 582 IPR025792 GO:0009019|GO:0030488
Gma12g02054 594 PANTHER TRNA METHYLTRANSFERASE 27 591 - -
Gma12g02054 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 316 582 IPR029063 -
Gma12g02054 594 Coils Coil 354 374 - -
Gma12g02054 594 Pfam Met-10+ like-protein 319 518 IPR030382 -
Gma12g02054 594 Gene3D Vaccinia Virus protein VP39 383 580 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02054 Gma-Chr12 41223123 41230419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02054 K15429 - gmx:100797627 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02054 12 41223123 41230419 Gma12g02054 12 41223123 41230419 ECH
Gma13g02500 13 39874076 39881555 Gma12g02054 12 41223123 41230419 GST