Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g02485 ATGGCCAACTTCCTCGCTCAGTTCCAGACTATTAAGAACACCTCGGATCGCCTTGTCATTTCAGTGGAGGATGTGAGTGACCTGTGGCCAACTGTCAAGCCTGCTTTTGAGGGGCGTTTGCCGTTCAAACGGGCGACTTTGAATAACAAGACGCGGAACCCTGTATTTGTTGACACATTGCCGGCCGAGTTCATATTAACCACCGATTCAAGACTCCGTAGCCGGTTCCCTCAGGAGCAATTTTTATTTTGGTTTCGAGAGCCGTATGTGACTGTTGTACTTGTCACCTGTGAGGATCTGGATGAGTTTAAAACCATCCTTAAACCACGCTTGAAATTAATTATCCAAAATGATGAAAAGGAGTGGTTCATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCAAGCAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACCCTGGATAGGCGTGTACAATTTTATGAGGATGAGATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAACTTTTTCATTCTTAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCATGAAGATGCCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAGAGAGACTTTGGAGGGGCAGATCATGGTGACGATCAAGCAGCATTGGTTAATCCAGGAAATAAAGCATTGACACAGATTGTTCAAGAGGACTCATTTCAGGAGTTTGAATTCAGACAGTATCTATTTGCCTGTCAGTCAAAGCTCTTATTCAAGTTAAATCGTCCCATTGAGGCTGCGTCACGTGGCTATTCATTCATAATAAGCTTCTCCAAATCCTTGGCATTGCATGAGCGTATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTAACAACTGCTTGCTTGGCTTTAATTGAAGCAACCACTTCTAATTATAATGATGGACATGTGGCGCCTGACGTAGAGAAGGAGTTCTTTCGTCTTCTGGGTGACCTATATTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGATATGGAACTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCTGCTGACACATCAACAGAGGTGCTTGAGAAAGAAAAGCTGATTCTACAAACAACTTCTAGAACCAAGCACTTTGGTATCCAGAGGAAACCCCTGCCTCTTGAACCTACTGTTCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGTCTGAAATATTTGACAGTCGCCAGGGTCCAATGGATGGATCAGGTTTTGATGCATCCACTAGAATGTCACCACAAAAAGCACTTGCAAGTTCCATGTCACGTACAAATTCTTCACCAGGAAACTTTGATAGCTCAATTGACCGACCAATGAGGCTTGCTGAGATTTTTGTTGCTGCTGAGCATGCTTTGAAGCAAACAATTTCTAATCCAGAACTGGGGAAATCATTATCATCATCCGAGGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTATCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTGGATTTTAAGCATGGATGTTTTGATCAAGCGGCAAAGTCATATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGAGTCTTAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGCCAAGCCTTTCAGTCAGAAGTTGTTCGTCTTGCTCATAGCGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAGTTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAGGGATCCTGGCATCCTTTCTGTAACCGTATGGAGTGGTTTTCCAGATGATATAACTCTCGATTCAATCAGTCTTACATTAAATGCAACATATAATACCGATGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCCATTGTGTTACACCCTGGTCGGAATACTATTACCTTGAATCTACCACCTCAGAAACCAGGATCTTATGTTCTCGGAGTTCTTACTGGGCAGATTGGGCATTTGAGGTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCCGCTGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTCTGAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGGTTGGCATTTTAGTTCGACCTGTAAATTACTCGCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTTGCATGTAATTGAGATGGAAACCGATGCTGCTGGTGTATCTCGGGGTGATGATGACCAGGTGCAGAATGATGGTGCTCAGATAAGAACTCTAAATTCTGATAAAAAATTTGAATGTTTGACTCTTCATGATGGTAAAATAGAATTTCCAAATTGGGCAAGTGACACTCCTTCTATTCTTTGGGTTCTGGTTCGTGCCATCAGTGACACGCTCAGCAGAGGATCTTCTTCAGCCACAACAAGGAGAGAAAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACGTATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACATTGACCATTTATGATGCCTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGACCTAATTCAAGTTTCTTCCCGCTAAACATATCTCCCACTTCCAAAGGAGGAATATTGTTTAGTATCTGCCTAGACAACACAAATGCAGAAGAAGCCAGGAAGCAATCAGAAAGCATATTAAATGTCAAATATGGAATTTCTGGCGATAGAACAATTGGAGCTCACCCTCCTGTCATGAATGAATCTACTGGAGTTGATGGTGCCAGACAAGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCTAAGAGTAGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTAGATGAGGAAGGAGTTTCTAAACAGAATGATGAGATGCTATACGAGGTAAATGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATATGCATCTCTGTCCACAAAACAAGGGGCAAGAATAGTTATCTCGGTACTATGCATGCCACTGGTGGCTGGTTATGTTCACCCTCCCGTACTTGGGCTGCCAGATGTTGATGAGGCAAATATAAGCTGCAAACCTGCTGGGCCACATCTGGTTTGTGTTTTGCCACCGCCTCTCAGCTCCTCCTTCTGCATTCCAGTTAATTCATGA 3777 0.4236 MANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEGRLPFKRATLNNKTRNPVFVDTLPAEFILTTDSRLRSRFPQEQFLFWFREPYVTVVLVTCEDLDEFKTILKPRLKLIIQNDEKEWFIVFVSKAHPANDQASKMAKKVYAKLEVEFNTKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALVNPGNKALTQIVQEDSFQEFEFRQYLFACQSKLLFKLNRPIEAASRGYSFIISFSKSLALHERILPFCMREVWVTTACLALIEATTSNYNDGHVAPDVEKEFFRLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKPAVWPSVPADTSTEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEIFDSRQGPMDGSGFDASTRMSPQKALASSMSRTNSSPGNFDSSIDRPMRLAEIFVAAEHALKQTISNPELGKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVDFKHGCFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKSLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVVRLAHSEMKDPVPLDVSSLVTFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLNLPPQKPGSYVLGVLTGQIGHLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEDQWVGILVRPVNYSLKAAVLHIDTGPGLEIKELHVIEMETDAAGVSRGDDDQVQNDGAQIRTLNSDKKFECLTLHDGKIEFPNWASDTPSILWVLVRAISDTLSRGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHTGQTEGRPNSSFFPLNISPTSKGGILFSICLDNTNAEEARKQSESILNVKYGISGDRTIGAHPPVMNESTGVDGARQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEEGVSKQNDEMLYEVNANSGNWMIAGRKRGYASLSTKQGARIVISVLCMPLVAGYVHPPVLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVNS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g02485 1258 PANTHER BNAC09G30770D PROTEIN 1 1256 - -
Gma13g02485 1258 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1140 1219 IPR022233 -
Gma13g02485 1258 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1256 IPR045126 GO:0048193|GO:1990071
Gma13g02485 1258 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g02485 Gma-Chr13 39690331 39702629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g02485 K20307 - gmx:100787264 2524.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02485 13 39690331 39702629 Gma13g02485 13 39690331 39702629 ECH
Gma13g02485 13 39690331 39702629 Gma12g02077 12 41481567 41493535 GST