Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g02077 ATGGCCAACTTCCTCGCTCAGTTCCAGACTATTAAGAACACCTCCGATCGCCTTGTCATTTCAGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAGCCTGCTTTTGAGGCGCGTTTGCCGTTCAAAAGGGCGACTTTGAATAACAAGACGCGGAACCCTGTCTTTGTTGACACATTGCCGGCAGAGTTCATATTAACTACCGATTCAAGACTCCGTAGCCGGTTCCCTCAGGAGCAATTTTTATTTTGGTTCCGAGAGCCGTATGCGACTGTTGTACTTGTCACCTGTGAGGATCTGGATGAGTTTAAAACCATCCTTAAACCACGCTTGAAATTAATTGTCCAAAATGATGAAAAGGAGTGGTTTGTTGTATTTGTGTCTAAAGCTCATCCAGCTAATGATCAGGCAAGCAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAGTATGATATGCATTTCCCTGAAGCAAAATTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACTCTGGATAGGCGTGTACAATTTTATGAGGACGAGATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAACTTTTTCATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCATGAAGATGCCTTACGGGAATATGACGAACTAGAACTCTGCTATCTTGAAACAGTCAACATGACTGGAAAGCAGAGAGACTTTGGAGGGGCAGATCATGGTGACGATCAAGCAGCATTTCTTAATCCAGGAAATAAAGCATTGACACAGATTGTTCAAGAGGACTCATTTCGGGAGTTTGAATTCAGACAGTATCTGTTTGCCTGTCAATCAAAGCTCTTGTTCAAGCTAAATCGTCCCATTGAGGCTGCATCACGAGGCTATTCATTCATAATAAGCTTCTCCAAATCCTTGGCATTGCATGAGCGTATTCTGCCATTTTGTATGCGTGAAGTCTGGGTAACAACTGCTTGCTTGGCTTTAATTAAAGCAACCACTTCTAATTATAATGATGGACATGTGGCACCTGACATAGAGAAGGAGTTCTTTCGCCTTCTGGGTGACCTATATTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGAACTGATATAGAAAGAAGTCCTGTCAACAGCGCTTCCCTTAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCTGTTGATGCATCAACAGAGGTGCTTGAGAAAGAAAAGCTGATTCTACAAACAACTTCTAGAACCAAGCACTTTGGTATCCAGAGGAAACCCCTCCCTCTTGAACCTACTGTTCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGCCTGAAATGTTTGACAGTCGCCAGGGTCCAATGGATGGATCAGGTTTCGATGCATCCACAAGAATGTCACCACAAAAAGCACTTGCAAGTACCATGTCACGTACAAATTCTTCGCCAGGAAACTTTGATAGCTCAATTGACCAACCGATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACAATTTCTCATACAGAGCTGTGGAAATCATTATCATCATCTGAGGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCCGCTGACAATTATCATGGTTCCTGGTGGAAAAGACATGGTGTTGTTCTTGATGGTGAGATAGCAGCTGTGGCTTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGAGTCTTAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGTCAGGCCTTTCAGTCAGAAGTTGTTCGTCTTGCTCATAGCGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAGGGATCCTGGTATCCTTTCTGTAACTGTATGGAGTGGTTTTCCAGATGATATAACTCTCGATTCAATGAGTCTTACATTAAACGCAACATATAATACTGATGAAGGTGTAAAGGCGTTGAAGAGTTCTACAGCCATTGTGTTACACCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTCAGATCTCATAGTTTTTCAAAAGTTGGTCCTGAAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTCTGAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGGTTGGTATTTTAGTTCGACCATTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTCGCACGTAATTGAGATGGAAACCGATGCTGATGTACAGAATGATGGTGCTCAGATAAGAACTCTAAATTCTGATAAAAAATTTGAACGTTTGACTCTTCATGATGGTAAAATCAAATTTCCAAATTGGGCAAGTGACACTCCTTCTATTCTTTGGGTTCTGGTTTGTGCCATCAGTGACACACTCAGCAGAGGATCTTCTTCAGCCACAACAAGGAGAGAAAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGTATTTGGAGCATTCTACAATCAGATATTCGAAAGGACACTAGCAGTGCATTTTACATATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTTAAGGCTACACTGGCCATTTATGATGCCTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGACCTAATTCAAGTTTCTTCCCACTAATCATATCTCCCACTTCCAAAGCAGGAATATTGTTTAGTATCTGCCTAGACAAGTCAAATGCAGAAGAAGCTAGGAAGCAACCCGAAAGCATAGTGAATATCAAATATGGAATTTCTGGCGATAGAACAATTGGAGCCCACCCTCCTGCCATGAATGAATCTACTGGAGTTGATGGTGCCAGACAGGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGACTAAGAGTTGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTGAATGAGGAAGGAGTTTCTAAACAAAATTATGAGGTGCTATATGAGGTAAATGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATATGCATCTCTGTCCACAAAACAAGGCGCAAGAATAGTTATCTCGGTATTATGCATGCCACTGGTGGCTGGTTATGTTCACCCTCCCGTGCTTGGACTGCCAGATGTTGAAGAGGCAAATATAAGCTGCAAACCTGCTGGGCCACATTTGGTTTGTGTTTTGCCACCGCCTCTCAGCTCCTCCTTCTGCATTCCAGTTAATTCATGA 3750 0.4224 MANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEARLPFKRATLNNKTRNPVFVDTLPAEFILTTDSRLRSRFPQEQFLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEKEWFVVFVSKAHPANDQASKMAKKVYAKLEVEFNTKKRERCCKYDMHFPEAKFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAAFLNPGNKALTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAASRGYSFIISFSKSLALHERILPFCMREVWVTTACLALIKATTSNYNDGHVAPDIEKEFFRLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKPAVWPSVPVDASTEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVPEMFDSRQGPMDGSGFDASTRMSPQKALASTMSRTNSSPGNFDSSIDQPMRLAEIFIAAEHALKQTISHTELWKSLSSSEEFEQKYLELTKGAADNYHGSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKSLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSMSLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPEDSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEDQWVGILVRPLNYSLKAAVLHIDTGPGLEIKESHVIEMETDADVQNDGAQIRTLNSDKKFERLTLHDGKIKFPNWASDTPSILWVLVCAISDTLSRGSSSATTRRESIVDGMRTIALKLVFGAFYNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLAIYDAWLDLQDGFVHTGQTEGRPNSSFFPLIISPTSKAGILFSICLDKSNAEEARKQPESIVNIKYGISGDRTIGAHPPAMNESTGVDGARQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLNEEGVSKQNYEVLYEVNANSGNWMIAGRKRGYASLSTKQGARIVISVLCMPLVAGYVHPPVLGLPDVEEANISCKPAGPHLVCVLPPPLSSSFCIPVNS 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g02077 1249 PANTHER BNAC09G30770D PROTEIN 1 1247 - -
Gma12g02077 1249 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1247 IPR045126 GO:0048193|GO:1990071
Gma12g02077 1249 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1131 1210 IPR022233 -
Gma12g02077 1249 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g02077 Gma-Chr12 41481567 41493535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g02077 K20307 - gmx:100782619 2499.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g02077 12 41481567 41493535 Gma12g02077 12 41481567 41493535 ECH
Gma13g02485 13 39690331 39702629 Gma12g02077 12 41481567 41493535 GST